Gene : AT1G53860 A. thaliana TAIR10
Defline:  (1 of 17) PF03763 - Remorin, C-terminal region (Remorin_C) Genomic Order:  4435
Name:  ? AT1G53860 Secondary Identifier:  ? PAC:19651554
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G53860 0.5kb upstream 0.5kb upstream 2905 true Chr1: 20107107-20110011 Arabidopsis thaliana
AT1G53860 0.5kb upstream 0.5kb upstream 500 false Chr1: 20109512-20110011 Arabidopsis thaliana
AT1G53860 0.5kb downstream 0.5kb downstream 2905 true Chr1: 20106607-20109511 Arabidopsis thaliana
AT1G53860 0.5kb downstream 0.5kb downstream 500 false Chr1: 20106607-20107106 Arabidopsis thaliana
AT1G53860 1.0kb upstream 1.0kb upstream 3405 true Chr1: 20107107-20110511 Arabidopsis thaliana
AT1G53860 1.0kb upstream 1.0kb upstream 1000 false Chr1: 20109512-20110511 Arabidopsis thaliana
AT1G53860 1.0kb downstream 1.0kb downstream 3405 true Chr1: 20106107-20109511 Arabidopsis thaliana
AT1G53860 1.0kb downstream 1.0kb downstream 1000 false Chr1: 20106107-20107106 Arabidopsis thaliana
AT1G53860 2.0kb upstream 2.0kb upstream 4405 true Chr1: 20107107-20111511 Arabidopsis thaliana
AT1G53860 2.0kb upstream 2.0kb upstream 2000 false Chr1: 20109512-20111511 Arabidopsis thaliana
AT1G53860 2.0kb downstream 2.0kb downstream 4405 true Chr1: 20105107-20109511 Arabidopsis thaliana
AT1G53860 2.0kb downstream 2.0kb downstream 2000 false Chr1: 20105107-20107106 Arabidopsis thaliana
AT1G53860 5.0kb upstream 5.0kb upstream 7405 true Chr1: 20107107-20114511 Arabidopsis thaliana
AT1G53860 5.0kb upstream 5.0kb upstream 5000 false Chr1: 20109512-20114511 Arabidopsis thaliana
AT1G53860 5.0kb downstream 5.0kb downstream 7405 true Chr1: 20102107-20109511 Arabidopsis thaliana
AT1G53860 5.0kb downstream 5.0kb downstream 5000 false Chr1: 20102107-20107106 Arabidopsis thaliana
AT1G53860 10.0kb upstream 10.0kb upstream 12405 true Chr1: 20107107-20119511 Arabidopsis thaliana
AT1G53860 10.0kb upstream 10.0kb upstream 10000 false Chr1: 20109512-20119511 Arabidopsis thaliana
AT1G53860 10.0kb downstream 10.0kb downstream 12405 true Chr1: 20097107-20109511 Arabidopsis thaliana
AT1G53860 10.0kb downstream 10.0kb downstream 10000 false Chr1: 20097107-20107106 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370464 5261 Brassicaceae View MSA
123830210 5264 Brassicales-Malvales View MSA
124337192 5266 SBM View MSA
124244607 5268 Malvidae View MSA
124063803 5270 Rosid View MSA
123738792 5271 Pentapetalae View MSA
122797186 5272 Eudicot View MSA
122043935 5273 Angiosperm View MSA
121310211 5274 Embryophyte View MSA
123347763 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.309        
cufflinks 0.44        
cufflinks 0.281        
cufflinks 1.016       High
cufflinks 0.183     Low Low
cufflinks 0.408        

0 Strain