Gene : AGL12 A. thaliana TAIR10
Primary Identifier:  ? AT1G71692 Defline:  (1 of 1) PTHR11945:SF152 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL12
Genomic Order:  6121 Name:  ? AT1G71692
Secondary Identifier:  ? PAC:19653064
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G71692 0.5kb upstream 0.5kb upstream 2983 true Chr1: 26952645-26955627 Arabidopsis thaliana
AT1G71692 0.5kb upstream 0.5kb upstream 500 false Chr1: 26955128-26955627 Arabidopsis thaliana
AT1G71692 0.5kb downstream 0.5kb downstream 2983 true Chr1: 26952145-26955127 Arabidopsis thaliana
AT1G71692 0.5kb downstream 0.5kb downstream 500 false Chr1: 26952145-26952644 Arabidopsis thaliana
AT1G71692 1.0kb upstream 1.0kb upstream 3483 true Chr1: 26952645-26956127 Arabidopsis thaliana
AT1G71692 1.0kb upstream 1.0kb upstream 1000 false Chr1: 26955128-26956127 Arabidopsis thaliana
AT1G71692 1.0kb downstream 1.0kb downstream 3483 true Chr1: 26951645-26955127 Arabidopsis thaliana
AT1G71692 1.0kb downstream 1.0kb downstream 1000 false Chr1: 26951645-26952644 Arabidopsis thaliana
AT1G71692 2.0kb upstream 2.0kb upstream 4483 true Chr1: 26952645-26957127 Arabidopsis thaliana
AT1G71692 2.0kb upstream 2.0kb upstream 2000 false Chr1: 26955128-26957127 Arabidopsis thaliana
AT1G71692 2.0kb downstream 2.0kb downstream 4483 true Chr1: 26950645-26955127 Arabidopsis thaliana
AT1G71692 2.0kb downstream 2.0kb downstream 2000 false Chr1: 26950645-26952644 Arabidopsis thaliana
AT1G71692 5.0kb upstream 5.0kb upstream 7483 true Chr1: 26952645-26960127 Arabidopsis thaliana
AT1G71692 5.0kb upstream 5.0kb upstream 5000 false Chr1: 26955128-26960127 Arabidopsis thaliana
AT1G71692 5.0kb downstream 5.0kb downstream 7483 true Chr1: 26947645-26955127 Arabidopsis thaliana
AT1G71692 5.0kb downstream 5.0kb downstream 5000 false Chr1: 26947645-26952644 Arabidopsis thaliana
AT1G71692 10.0kb upstream 10.0kb upstream 12483 true Chr1: 26952645-26965127 Arabidopsis thaliana
AT1G71692 10.0kb upstream 10.0kb upstream 10000 false Chr1: 26955128-26965127 Arabidopsis thaliana
AT1G71692 10.0kb downstream 10.0kb downstream 12483 true Chr1: 26942645-26955127 Arabidopsis thaliana
AT1G71692 10.0kb downstream 10.0kb downstream 10000 false Chr1: 26942645-26952644 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026526 5273 Angiosperm View MSA
122365782 5261 Brassicaceae View MSA
123827979 5264 Brassicales-Malvales View MSA
124340633 5266 SBM View MSA
124251112 5268 Malvidae View MSA
124065817 5270 Rosid View MSA
123738815 5271 Pentapetalae View MSA
122789214 5272 Eudicot View MSA
121296369 5274 Embryophyte View MSA
123334545 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.022     Low  
cufflinks 9.2        
cufflinks 0.006     Low Low
cufflinks 12.35        
cufflinks 0.013     Low  
cufflinks 12.112        

0 Strain