Gene : PFI A. thaliana TAIR10
Primary Identifier:  ? AT1G71440 Defline:  (1 of 1) PTHR15140 - TUBULIN-SPECIFIC CHAPERONE E
Genomic Order:  6109 Name:  ? AT1G71440
Secondary Identifier:  ? PAC:19649871
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G71440 0.5kb upstream 0.5kb upstream 3827 true Chr1: 26921060-26924886 Arabidopsis thaliana
AT1G71440 0.5kb upstream 0.5kb upstream 500 false Chr1: 26924387-26924886 Arabidopsis thaliana
AT1G71440 0.5kb downstream 0.5kb downstream 3827 true Chr1: 26920560-26924386 Arabidopsis thaliana
AT1G71440 0.5kb downstream 0.5kb downstream 500 false Chr1: 26920560-26921059 Arabidopsis thaliana
AT1G71440 1.0kb upstream 1.0kb upstream 4327 true Chr1: 26921060-26925386 Arabidopsis thaliana
AT1G71440 1.0kb upstream 1.0kb upstream 1000 false Chr1: 26924387-26925386 Arabidopsis thaliana
AT1G71440 1.0kb downstream 1.0kb downstream 4327 true Chr1: 26920060-26924386 Arabidopsis thaliana
AT1G71440 1.0kb downstream 1.0kb downstream 1000 false Chr1: 26920060-26921059 Arabidopsis thaliana
AT1G71440 2.0kb upstream 2.0kb upstream 5327 true Chr1: 26921060-26926386 Arabidopsis thaliana
AT1G71440 2.0kb upstream 2.0kb upstream 2000 false Chr1: 26924387-26926386 Arabidopsis thaliana
AT1G71440 2.0kb downstream 2.0kb downstream 5327 true Chr1: 26919060-26924386 Arabidopsis thaliana
AT1G71440 2.0kb downstream 2.0kb downstream 2000 false Chr1: 26919060-26921059 Arabidopsis thaliana
AT1G71440 5.0kb upstream 5.0kb upstream 8327 true Chr1: 26921060-26929386 Arabidopsis thaliana
AT1G71440 5.0kb upstream 5.0kb upstream 5000 false Chr1: 26924387-26929386 Arabidopsis thaliana
AT1G71440 5.0kb downstream 5.0kb downstream 8327 true Chr1: 26916060-26924386 Arabidopsis thaliana
AT1G71440 5.0kb downstream 5.0kb downstream 5000 false Chr1: 26916060-26921059 Arabidopsis thaliana
AT1G71440 10.0kb upstream 10.0kb upstream 13327 true Chr1: 26921060-26934386 Arabidopsis thaliana
AT1G71440 10.0kb upstream 10.0kb upstream 10000 false Chr1: 26924387-26934386 Arabidopsis thaliana
AT1G71440 10.0kb downstream 10.0kb downstream 13327 true Chr1: 26911060-26924386 Arabidopsis thaliana
AT1G71440 10.0kb downstream 10.0kb downstream 10000 false Chr1: 26911060-26921059 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373510 5261 Brassicaceae View MSA
123831151 5264 Brassicales-Malvales View MSA
124342120 5266 SBM View MSA
124242699 5268 Malvidae View MSA
124069178 5270 Rosid View MSA
123740521 5271 Pentapetalae View MSA
122789325 5272 Eudicot View MSA
122048021 5273 Angiosperm View MSA
121345532 5274 Embryophyte View MSA
123427074 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.619       Low
cufflinks 6.544        
cufflinks 5.878        
cufflinks 7.104        
cufflinks 5.975        
cufflinks 7.697       High

0 Strain