Gene : AT1G71060 A. thaliana TAIR10
Defline:  (1 of 24) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  6070
Name:  ? AT1G71060 Secondary Identifier:  ? PAC:19654471
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G71060 0.5kb upstream 0.5kb upstream 2033 true Chr1: 26805651-26807683 Arabidopsis thaliana
AT1G71060 0.5kb upstream 0.5kb upstream 500 false Chr1: 26807184-26807683 Arabidopsis thaliana
AT1G71060 0.5kb downstream 0.5kb downstream 2033 true Chr1: 26805151-26807183 Arabidopsis thaliana
AT1G71060 0.5kb downstream 0.5kb downstream 500 false Chr1: 26805151-26805650 Arabidopsis thaliana
AT1G71060 1.0kb upstream 1.0kb upstream 2533 true Chr1: 26805651-26808183 Arabidopsis thaliana
AT1G71060 1.0kb upstream 1.0kb upstream 1000 false Chr1: 26807184-26808183 Arabidopsis thaliana
AT1G71060 1.0kb downstream 1.0kb downstream 2533 true Chr1: 26804651-26807183 Arabidopsis thaliana
AT1G71060 1.0kb downstream 1.0kb downstream 1000 false Chr1: 26804651-26805650 Arabidopsis thaliana
AT1G71060 2.0kb upstream 2.0kb upstream 3533 true Chr1: 26805651-26809183 Arabidopsis thaliana
AT1G71060 2.0kb upstream 2.0kb upstream 2000 false Chr1: 26807184-26809183 Arabidopsis thaliana
AT1G71060 2.0kb downstream 2.0kb downstream 3533 true Chr1: 26803651-26807183 Arabidopsis thaliana
AT1G71060 2.0kb downstream 2.0kb downstream 2000 false Chr1: 26803651-26805650 Arabidopsis thaliana
AT1G71060 5.0kb upstream 5.0kb upstream 6533 true Chr1: 26805651-26812183 Arabidopsis thaliana
AT1G71060 5.0kb upstream 5.0kb upstream 5000 false Chr1: 26807184-26812183 Arabidopsis thaliana
AT1G71060 5.0kb downstream 5.0kb downstream 6533 true Chr1: 26800651-26807183 Arabidopsis thaliana
AT1G71060 5.0kb downstream 5.0kb downstream 5000 false Chr1: 26800651-26805650 Arabidopsis thaliana
AT1G71060 10.0kb upstream 10.0kb upstream 11533 true Chr1: 26805651-26817183 Arabidopsis thaliana
AT1G71060 10.0kb upstream 10.0kb upstream 10000 false Chr1: 26807184-26817183 Arabidopsis thaliana
AT1G71060 10.0kb downstream 10.0kb downstream 11533 true Chr1: 26795651-26807183 Arabidopsis thaliana
AT1G71060 10.0kb downstream 10.0kb downstream 10000 false Chr1: 26795651-26805650 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375330 5261 Brassicaceae View MSA
123831875 5264 Brassicales-Malvales View MSA
124342962 5266 SBM View MSA
124240747 5268 Malvidae View MSA
124063313 5270 Rosid View MSA
123738652 5271 Pentapetalae View MSA
122793005 5272 Eudicot View MSA
122045173 5273 Angiosperm View MSA
121310410 5274 Embryophyte View MSA
123347900 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.826        
cufflinks 4.413       High
cufflinks 3.034        
cufflinks 4.61       High
cufflinks 2.871        
cufflinks 3.705        

0 Strain