Gene : AT1G71140 A. thaliana TAIR10
Defline:  (1 of 14) PTHR11206:SF87 - MATE EFFLUX FAMILY PROTEIN-RELATED Genomic Order:  6078
Name:  ? AT1G71140 Secondary Identifier:  ? PAC:19650617
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G71140 0.5kb upstream 0.5kb upstream 2572 true Chr1: 26824177-26826748 Arabidopsis thaliana
AT1G71140 0.5kb upstream 0.5kb upstream 500 false Chr1: 26824177-26824676 Arabidopsis thaliana
AT1G71140 0.5kb downstream 0.5kb downstream 2572 true Chr1: 26824677-26827248 Arabidopsis thaliana
AT1G71140 0.5kb downstream 0.5kb downstream 500 false Chr1: 26826749-26827248 Arabidopsis thaliana
AT1G71140 1.0kb upstream 1.0kb upstream 3072 true Chr1: 26823677-26826748 Arabidopsis thaliana
AT1G71140 1.0kb upstream 1.0kb upstream 1000 false Chr1: 26823677-26824676 Arabidopsis thaliana
AT1G71140 1.0kb downstream 1.0kb downstream 3072 true Chr1: 26824677-26827748 Arabidopsis thaliana
AT1G71140 1.0kb downstream 1.0kb downstream 1000 false Chr1: 26826749-26827748 Arabidopsis thaliana
AT1G71140 2.0kb upstream 2.0kb upstream 4072 true Chr1: 26822677-26826748 Arabidopsis thaliana
AT1G71140 2.0kb upstream 2.0kb upstream 2000 false Chr1: 26822677-26824676 Arabidopsis thaliana
AT1G71140 2.0kb downstream 2.0kb downstream 4072 true Chr1: 26824677-26828748 Arabidopsis thaliana
AT1G71140 2.0kb downstream 2.0kb downstream 2000 false Chr1: 26826749-26828748 Arabidopsis thaliana
AT1G71140 5.0kb upstream 5.0kb upstream 7072 true Chr1: 26819677-26826748 Arabidopsis thaliana
AT1G71140 5.0kb upstream 5.0kb upstream 5000 false Chr1: 26819677-26824676 Arabidopsis thaliana
AT1G71140 5.0kb downstream 5.0kb downstream 7072 true Chr1: 26824677-26831748 Arabidopsis thaliana
AT1G71140 5.0kb downstream 5.0kb downstream 5000 false Chr1: 26826749-26831748 Arabidopsis thaliana
AT1G71140 10.0kb upstream 10.0kb upstream 12072 true Chr1: 26814677-26826748 Arabidopsis thaliana
AT1G71140 10.0kb upstream 10.0kb upstream 10000 false Chr1: 26814677-26824676 Arabidopsis thaliana
AT1G71140 10.0kb downstream 10.0kb downstream 12072 true Chr1: 26824677-26836748 Arabidopsis thaliana
AT1G71140 10.0kb downstream 10.0kb downstream 10000 false Chr1: 26826749-26836748 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376703 5261 Brassicaceae View MSA
123841604 5264 Brassicales-Malvales View MSA
124349930 5266 SBM View MSA
124254486 5268 Malvidae View MSA
124070136 5270 Rosid View MSA
123747121 5271 Pentapetalae View MSA
122794225 5272 Eudicot View MSA
122042479 5273 Angiosperm View MSA
121350842 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.638        
cufflinks 0.376       Low
cufflinks 4.719        
cufflinks 3.307        
cufflinks 7.785        
cufflinks 0.197     Low Low

0 Strain