Gene : HWI1 A. thaliana TAIR10
Primary Identifier:  ? AT1G70690 Defline:  (1 of 2) PTHR32080//PTHR32080:SF3 - FAMILY NOT NAMED // CYSTEINE-RICH REPEAT SECRETORY PROTEIN 12-RELATED
Genomic Order:  6028 Name:  ? AT1G70690
Secondary Identifier:  ? PAC:19657257
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G70690 0.5kb upstream 0.5kb upstream 2131 true Chr1: 26651513-26653643 Arabidopsis thaliana
AT1G70690 0.5kb upstream 0.5kb upstream 500 false Chr1: 26651513-26652012 Arabidopsis thaliana
AT1G70690 0.5kb downstream 0.5kb downstream 2131 true Chr1: 26652013-26654143 Arabidopsis thaliana
AT1G70690 0.5kb downstream 0.5kb downstream 500 false Chr1: 26653644-26654143 Arabidopsis thaliana
AT1G70690 1.0kb upstream 1.0kb upstream 2631 true Chr1: 26651013-26653643 Arabidopsis thaliana
AT1G70690 1.0kb upstream 1.0kb upstream 1000 false Chr1: 26651013-26652012 Arabidopsis thaliana
AT1G70690 1.0kb downstream 1.0kb downstream 2631 true Chr1: 26652013-26654643 Arabidopsis thaliana
AT1G70690 1.0kb downstream 1.0kb downstream 1000 false Chr1: 26653644-26654643 Arabidopsis thaliana
AT1G70690 2.0kb upstream 2.0kb upstream 3631 true Chr1: 26650013-26653643 Arabidopsis thaliana
AT1G70690 2.0kb upstream 2.0kb upstream 2000 false Chr1: 26650013-26652012 Arabidopsis thaliana
AT1G70690 2.0kb downstream 2.0kb downstream 3631 true Chr1: 26652013-26655643 Arabidopsis thaliana
AT1G70690 2.0kb downstream 2.0kb downstream 2000 false Chr1: 26653644-26655643 Arabidopsis thaliana
AT1G70690 5.0kb upstream 5.0kb upstream 6631 true Chr1: 26647013-26653643 Arabidopsis thaliana
AT1G70690 5.0kb upstream 5.0kb upstream 5000 false Chr1: 26647013-26652012 Arabidopsis thaliana
AT1G70690 5.0kb downstream 5.0kb downstream 6631 true Chr1: 26652013-26658643 Arabidopsis thaliana
AT1G70690 5.0kb downstream 5.0kb downstream 5000 false Chr1: 26653644-26658643 Arabidopsis thaliana
AT1G70690 10.0kb upstream 10.0kb upstream 11631 true Chr1: 26642013-26653643 Arabidopsis thaliana
AT1G70690 10.0kb upstream 10.0kb upstream 10000 false Chr1: 26642013-26652012 Arabidopsis thaliana
AT1G70690 10.0kb downstream 10.0kb downstream 11631 true Chr1: 26652013-26663643 Arabidopsis thaliana
AT1G70690 10.0kb downstream 10.0kb downstream 10000 false Chr1: 26653644-26663643 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511009 5273 Angiosperm View MSA
122371088 5261 Brassicaceae View MSA
123800100 5264 Brassicales-Malvales View MSA
124297551 5266 SBM View MSA
124149408 5268 Malvidae View MSA
123875221 5270 Rosid View MSA
123459080 5271 Pentapetalae View MSA
122494475 5272 Eudicot View MSA
120784080 5274 Embryophyte View MSA
122826018 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.601        
cufflinks 6.256        
cufflinks 2.738       Low
cufflinks 16.464       High
cufflinks 4.601        
cufflinks 8.533        

0 Strain