Gene : MMP A. thaliana TAIR10
Primary Identifier:  ? AT1G70170 Defline:  (1 of 3) 3.4.24.22 - Stromelysin 2 / Transin 2
Genomic Order:  5975 Name:  ? AT1G70170
Secondary Identifier:  ? PAC:19655364
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G70170 0.5kb upstream 0.5kb upstream 1983 true Chr1: 26423374-26425356 Arabidopsis thaliana
AT1G70170 0.5kb upstream 0.5kb upstream 500 false Chr1: 26423374-26423873 Arabidopsis thaliana
AT1G70170 0.5kb downstream 0.5kb downstream 1983 true Chr1: 26423874-26425856 Arabidopsis thaliana
AT1G70170 0.5kb downstream 0.5kb downstream 500 false Chr1: 26425357-26425856 Arabidopsis thaliana
AT1G70170 1.0kb upstream 1.0kb upstream 2483 true Chr1: 26422874-26425356 Arabidopsis thaliana
AT1G70170 1.0kb upstream 1.0kb upstream 1000 false Chr1: 26422874-26423873 Arabidopsis thaliana
AT1G70170 1.0kb downstream 1.0kb downstream 2483 true Chr1: 26423874-26426356 Arabidopsis thaliana
AT1G70170 1.0kb downstream 1.0kb downstream 1000 false Chr1: 26425357-26426356 Arabidopsis thaliana
AT1G70170 2.0kb upstream 2.0kb upstream 3483 true Chr1: 26421874-26425356 Arabidopsis thaliana
AT1G70170 2.0kb upstream 2.0kb upstream 2000 false Chr1: 26421874-26423873 Arabidopsis thaliana
AT1G70170 2.0kb downstream 2.0kb downstream 3483 true Chr1: 26423874-26427356 Arabidopsis thaliana
AT1G70170 2.0kb downstream 2.0kb downstream 2000 false Chr1: 26425357-26427356 Arabidopsis thaliana
AT1G70170 5.0kb upstream 5.0kb upstream 6483 true Chr1: 26418874-26425356 Arabidopsis thaliana
AT1G70170 5.0kb upstream 5.0kb upstream 5000 false Chr1: 26418874-26423873 Arabidopsis thaliana
AT1G70170 5.0kb downstream 5.0kb downstream 6483 true Chr1: 26423874-26430356 Arabidopsis thaliana
AT1G70170 5.0kb downstream 5.0kb downstream 5000 false Chr1: 26425357-26430356 Arabidopsis thaliana
AT1G70170 10.0kb upstream 10.0kb upstream 11483 true Chr1: 26413874-26425356 Arabidopsis thaliana
AT1G70170 10.0kb upstream 10.0kb upstream 10000 false Chr1: 26413874-26423873 Arabidopsis thaliana
AT1G70170 10.0kb downstream 10.0kb downstream 11483 true Chr1: 26423874-26435356 Arabidopsis thaliana
AT1G70170 10.0kb downstream 10.0kb downstream 10000 false Chr1: 26425357-26435356 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041440 5273 Angiosperm View MSA
122373044 5261 Brassicaceae View MSA
123835470 5264 Brassicales-Malvales View MSA
124350845 5266 SBM View MSA
124249735 5268 Malvidae View MSA
124061806 5270 Rosid View MSA
123745217 5271 Pentapetalae View MSA
122786222 5272 Eudicot View MSA
121350353 5274 Embryophyte View MSA
123381692 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.8        
cufflinks 2.715        
cufflinks 0.361       Low
cufflinks 8.337       High
cufflinks 0.892        
cufflinks 3.912        

0 Strain