Gene : SP1L2 A. thaliana TAIR10
Primary Identifier:  ? AT1G69230 Defline:  (1 of 3) PTHR33403:SF1 - PROTEIN SPIRAL1
Genomic Order:  5876 Name:  ? AT1G69230
Secondary Identifier:  ? PAC:19654175
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G69230 0.5kb upstream 0.5kb upstream 1897 true Chr1: 26026312-26028208 Arabidopsis thaliana
AT1G69230 0.5kb upstream 0.5kb upstream 500 false Chr1: 26027709-26028208 Arabidopsis thaliana
AT1G69230 0.5kb downstream 0.5kb downstream 1897 true Chr1: 26025812-26027708 Arabidopsis thaliana
AT1G69230 0.5kb downstream 0.5kb downstream 500 false Chr1: 26025812-26026311 Arabidopsis thaliana
AT1G69230 1.0kb upstream 1.0kb upstream 2397 true Chr1: 26026312-26028708 Arabidopsis thaliana
AT1G69230 1.0kb upstream 1.0kb upstream 1000 false Chr1: 26027709-26028708 Arabidopsis thaliana
AT1G69230 1.0kb downstream 1.0kb downstream 2397 true Chr1: 26025312-26027708 Arabidopsis thaliana
AT1G69230 1.0kb downstream 1.0kb downstream 1000 false Chr1: 26025312-26026311 Arabidopsis thaliana
AT1G69230 2.0kb upstream 2.0kb upstream 3397 true Chr1: 26026312-26029708 Arabidopsis thaliana
AT1G69230 2.0kb upstream 2.0kb upstream 2000 false Chr1: 26027709-26029708 Arabidopsis thaliana
AT1G69230 2.0kb downstream 2.0kb downstream 3397 true Chr1: 26024312-26027708 Arabidopsis thaliana
AT1G69230 2.0kb downstream 2.0kb downstream 2000 false Chr1: 26024312-26026311 Arabidopsis thaliana
AT1G69230 5.0kb upstream 5.0kb upstream 6397 true Chr1: 26026312-26032708 Arabidopsis thaliana
AT1G69230 5.0kb upstream 5.0kb upstream 5000 false Chr1: 26027709-26032708 Arabidopsis thaliana
AT1G69230 5.0kb downstream 5.0kb downstream 6397 true Chr1: 26021312-26027708 Arabidopsis thaliana
AT1G69230 5.0kb downstream 5.0kb downstream 5000 false Chr1: 26021312-26026311 Arabidopsis thaliana
AT1G69230 10.0kb upstream 10.0kb upstream 11397 true Chr1: 26026312-26037708 Arabidopsis thaliana
AT1G69230 10.0kb upstream 10.0kb upstream 10000 false Chr1: 26027709-26037708 Arabidopsis thaliana
AT1G69230 10.0kb downstream 10.0kb downstream 11397 true Chr1: 26016312-26027708 Arabidopsis thaliana
AT1G69230 10.0kb downstream 10.0kb downstream 10000 false Chr1: 26016312-26026311 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377956 5261 Brassicaceae View MSA
123833538 5264 Brassicales-Malvales View MSA
124345469 5266 SBM View MSA
124239530 5268 Malvidae View MSA
124060662 5270 Rosid View MSA
123749851 5271 Pentapetalae View MSA
122787340 5272 Eudicot View MSA
122045105 5273 Angiosperm View MSA
121351504 5274 Embryophyte View MSA
123425662 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.251     Low  
cufflinks 44.164     High  
cufflinks 0.238     Low  
cufflinks 22.192        
cufflinks 0.293        
cufflinks 63.944     High High

0 Strain