Gene : RAV2 A. thaliana TAIR10
Primary Identifier:  ? AT1G68840 Defline:  (1 of 6) K09287 - RAV-like factor (RAV)
Genomic Order:  5838 Name:  ? AT1G68840
Secondary Identifier:  ? PAC:19649546
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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G68840 0.5kb upstream 0.5kb upstream 2400 true Chr1: 25879823-25882222 Arabidopsis thaliana
AT1G68840 0.5kb upstream 0.5kb upstream 500 false Chr1: 25879823-25880322 Arabidopsis thaliana
AT1G68840 0.5kb downstream 0.5kb downstream 2400 true Chr1: 25880323-25882722 Arabidopsis thaliana
AT1G68840 0.5kb downstream 0.5kb downstream 500 false Chr1: 25882223-25882722 Arabidopsis thaliana
AT1G68840 1.0kb upstream 1.0kb upstream 2900 true Chr1: 25879323-25882222 Arabidopsis thaliana
AT1G68840 1.0kb upstream 1.0kb upstream 1000 false Chr1: 25879323-25880322 Arabidopsis thaliana
AT1G68840 1.0kb downstream 1.0kb downstream 2900 true Chr1: 25880323-25883222 Arabidopsis thaliana
AT1G68840 1.0kb downstream 1.0kb downstream 1000 false Chr1: 25882223-25883222 Arabidopsis thaliana
AT1G68840 2.0kb upstream 2.0kb upstream 3900 true Chr1: 25878323-25882222 Arabidopsis thaliana
AT1G68840 2.0kb upstream 2.0kb upstream 2000 false Chr1: 25878323-25880322 Arabidopsis thaliana
AT1G68840 2.0kb downstream 2.0kb downstream 3900 true Chr1: 25880323-25884222 Arabidopsis thaliana
AT1G68840 2.0kb downstream 2.0kb downstream 2000 false Chr1: 25882223-25884222 Arabidopsis thaliana
AT1G68840 5.0kb upstream 5.0kb upstream 6900 true Chr1: 25875323-25882222 Arabidopsis thaliana
AT1G68840 5.0kb upstream 5.0kb upstream 5000 false Chr1: 25875323-25880322 Arabidopsis thaliana
AT1G68840 5.0kb downstream 5.0kb downstream 6900 true Chr1: 25880323-25887222 Arabidopsis thaliana
AT1G68840 5.0kb downstream 5.0kb downstream 5000 false Chr1: 25882223-25887222 Arabidopsis thaliana
AT1G68840 10.0kb upstream 10.0kb upstream 11900 true Chr1: 25870323-25882222 Arabidopsis thaliana
AT1G68840 10.0kb upstream 10.0kb upstream 10000 false Chr1: 25870323-25880322 Arabidopsis thaliana
AT1G68840 10.0kb downstream 10.0kb downstream 11900 true Chr1: 25880323-25892222 Arabidopsis thaliana
AT1G68840 10.0kb downstream 10.0kb downstream 10000 false Chr1: 25882223-25892222 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373165 5261 Brassicaceae View MSA
123837249 5264 Brassicales-Malvales View MSA
124346726 5266 SBM View MSA
124243477 5268 Malvidae View MSA
124062734 5270 Rosid View MSA
123743747 5271 Pentapetalae View MSA
122794960 5272 Eudicot View MSA
122047550 5273 Angiosperm View MSA
121310758 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.971        
cufflinks 14.37        
cufflinks 36.348     High High
cufflinks 10.574        
cufflinks 41.031     High High
cufflinks 4.567       Low

0 Strain