Gene : AP1 A. thaliana TAIR10
Primary Identifier:  ? AT1G69120 Defline:  (1 of 2) PTHR11945//PTHR11945:SF155 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATED
Genomic Order:  5867 Name:  ? AT1G69120
Secondary Identifier:  ? PAC:19653480
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G69120 0.5kb upstream 0.5kb upstream 4484 true Chr1: 25982330-25986813 Arabidopsis thaliana
AT1G69120 0.5kb upstream 0.5kb upstream 500 false Chr1: 25986314-25986813 Arabidopsis thaliana
AT1G69120 0.5kb downstream 0.5kb downstream 4484 true Chr1: 25981830-25986313 Arabidopsis thaliana
AT1G69120 0.5kb downstream 0.5kb downstream 500 false Chr1: 25981830-25982329 Arabidopsis thaliana
AT1G69120 1.0kb upstream 1.0kb upstream 4984 true Chr1: 25982330-25987313 Arabidopsis thaliana
AT1G69120 1.0kb upstream 1.0kb upstream 1000 false Chr1: 25986314-25987313 Arabidopsis thaliana
AT1G69120 1.0kb downstream 1.0kb downstream 4984 true Chr1: 25981330-25986313 Arabidopsis thaliana
AT1G69120 1.0kb downstream 1.0kb downstream 1000 false Chr1: 25981330-25982329 Arabidopsis thaliana
AT1G69120 2.0kb upstream 2.0kb upstream 5984 true Chr1: 25982330-25988313 Arabidopsis thaliana
AT1G69120 2.0kb upstream 2.0kb upstream 2000 false Chr1: 25986314-25988313 Arabidopsis thaliana
AT1G69120 2.0kb downstream 2.0kb downstream 5984 true Chr1: 25980330-25986313 Arabidopsis thaliana
AT1G69120 2.0kb downstream 2.0kb downstream 2000 false Chr1: 25980330-25982329 Arabidopsis thaliana
AT1G69120 5.0kb upstream 5.0kb upstream 8984 true Chr1: 25982330-25991313 Arabidopsis thaliana
AT1G69120 5.0kb upstream 5.0kb upstream 5000 false Chr1: 25986314-25991313 Arabidopsis thaliana
AT1G69120 5.0kb downstream 5.0kb downstream 8984 true Chr1: 25977330-25986313 Arabidopsis thaliana
AT1G69120 5.0kb downstream 5.0kb downstream 5000 false Chr1: 25977330-25982329 Arabidopsis thaliana
AT1G69120 10.0kb upstream 10.0kb upstream 13984 true Chr1: 25982330-25996313 Arabidopsis thaliana
AT1G69120 10.0kb upstream 10.0kb upstream 10000 false Chr1: 25986314-25996313 Arabidopsis thaliana
AT1G69120 10.0kb downstream 10.0kb downstream 13984 true Chr1: 25972330-25986313 Arabidopsis thaliana
AT1G69120 10.0kb downstream 10.0kb downstream 10000 false Chr1: 25972330-25982329 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041064 5273 Angiosperm View MSA
122369134 5261 Brassicaceae View MSA
123840374 5264 Brassicales-Malvales View MSA
124350359 5266 SBM View MSA
124246685 5268 Malvidae View MSA
124072328 5270 Rosid View MSA
123751710 5271 Pentapetalae View MSA
122788972 5272 Eudicot View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.258     Low High
cufflinks 0.031     Low  
cufflinks 0.059     Low  
cufflinks 0.076     Low  
cufflinks 0.157     Low  
cufflinks 0.023     Low Low

0 Strain