Sequence Feature Displayer
Ontology Annotation Displayer
3 Pathways
Pathway Identifier | Organism Name | Analysis Method | Analysis Status |
---|---|---|---|
Athaliana PWY-6147 | Arabidopsis thaliana | pathologic | |
Athaliana PWY-6612 | Arabidopsis thaliana | pathologic | |
Athaliana PWY-6614 | Arabidopsis thaliana | pathologic |
Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
AT1G69190 0.5kb upstream | 0.5kb | upstream | 2323 | true | Chr1: 26013012-26015334 | Arabidopsis thaliana |
AT1G69190 0.5kb upstream | 0.5kb | upstream | 500 | false | Chr1: 26014835-26015334 | Arabidopsis thaliana |
AT1G69190 0.5kb downstream | 0.5kb | downstream | 2323 | true | Chr1: 26012512-26014834 | Arabidopsis thaliana |
AT1G69190 0.5kb downstream | 0.5kb | downstream | 500 | false | Chr1: 26012512-26013011 | Arabidopsis thaliana |
AT1G69190 1.0kb upstream | 1.0kb | upstream | 2823 | true | Chr1: 26013012-26015834 | Arabidopsis thaliana |
AT1G69190 1.0kb upstream | 1.0kb | upstream | 1000 | false | Chr1: 26014835-26015834 | Arabidopsis thaliana |
AT1G69190 1.0kb downstream | 1.0kb | downstream | 2823 | true | Chr1: 26012012-26014834 | Arabidopsis thaliana |
AT1G69190 1.0kb downstream | 1.0kb | downstream | 1000 | false | Chr1: 26012012-26013011 | Arabidopsis thaliana |
AT1G69190 2.0kb upstream | 2.0kb | upstream | 3823 | true | Chr1: 26013012-26016834 | Arabidopsis thaliana |
AT1G69190 2.0kb upstream | 2.0kb | upstream | 2000 | false | Chr1: 26014835-26016834 | Arabidopsis thaliana |
AT1G69190 2.0kb downstream | 2.0kb | downstream | 3823 | true | Chr1: 26011012-26014834 | Arabidopsis thaliana |
AT1G69190 2.0kb downstream | 2.0kb | downstream | 2000 | false | Chr1: 26011012-26013011 | Arabidopsis thaliana |
AT1G69190 5.0kb upstream | 5.0kb | upstream | 6823 | true | Chr1: 26013012-26019834 | Arabidopsis thaliana |
AT1G69190 5.0kb upstream | 5.0kb | upstream | 5000 | false | Chr1: 26014835-26019834 | Arabidopsis thaliana |
AT1G69190 5.0kb downstream | 5.0kb | downstream | 6823 | true | Chr1: 26008012-26014834 | Arabidopsis thaliana |
AT1G69190 5.0kb downstream | 5.0kb | downstream | 5000 | false | Chr1: 26008012-26013011 | Arabidopsis thaliana |
AT1G69190 10.0kb upstream | 10.0kb | upstream | 11823 | true | Chr1: 26013012-26024834 | Arabidopsis thaliana |
AT1G69190 10.0kb upstream | 10.0kb | upstream | 10000 | false | Chr1: 26014835-26024834 | Arabidopsis thaliana |
AT1G69190 10.0kb downstream | 10.0kb | downstream | 11823 | true | Chr1: 26003012-26014834 | Arabidopsis thaliana |
AT1G69190 10.0kb downstream | 10.0kb | downstream | 10000 | false | Chr1: 26003012-26013011 | Arabidopsis thaliana |
10 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
122379382 | 5261 | Brassicaceae | View MSA |
123802238 | 5264 | Brassicales-Malvales | View MSA |
124299450 | 5266 | SBM | View MSA |
124150860 | 5268 | Malvidae | View MSA |
123876402 | 5270 | Rosid | View MSA |
123746213 | 5271 | Pentapetalae | View MSA |
122790018 | 5272 | Eudicot | View MSA |
122044899 | 5273 | Angiosperm | View MSA |
121345768 | 5274 | Embryophyte | View MSA |
123427891 | 5275 | Viridiplantae | View MSA |
6 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.008 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.008 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.008 | Low |