Gene : AT1G68290 A. thaliana TAIR10
Defline:  (1 of 5) 3.1.30.1 - Aspergillus nuclease S(1) / Single-stranded-nucleate endonuclease Genomic Order:  5777
Name:  ? AT1G68290 Secondary Identifier:  ? PAC:19649508
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G68290 0.5kb upstream 0.5kb upstream 2268 true Chr1: 25596171-25598438 Arabidopsis thaliana
AT1G68290 0.5kb upstream 0.5kb upstream 500 false Chr1: 25596171-25596670 Arabidopsis thaliana
AT1G68290 0.5kb downstream 0.5kb downstream 2268 true Chr1: 25596671-25598938 Arabidopsis thaliana
AT1G68290 0.5kb downstream 0.5kb downstream 500 false Chr1: 25598439-25598938 Arabidopsis thaliana
AT1G68290 1.0kb upstream 1.0kb upstream 2768 true Chr1: 25595671-25598438 Arabidopsis thaliana
AT1G68290 1.0kb upstream 1.0kb upstream 1000 false Chr1: 25595671-25596670 Arabidopsis thaliana
AT1G68290 1.0kb downstream 1.0kb downstream 2768 true Chr1: 25596671-25599438 Arabidopsis thaliana
AT1G68290 1.0kb downstream 1.0kb downstream 1000 false Chr1: 25598439-25599438 Arabidopsis thaliana
AT1G68290 2.0kb upstream 2.0kb upstream 3768 true Chr1: 25594671-25598438 Arabidopsis thaliana
AT1G68290 2.0kb upstream 2.0kb upstream 2000 false Chr1: 25594671-25596670 Arabidopsis thaliana
AT1G68290 2.0kb downstream 2.0kb downstream 3768 true Chr1: 25596671-25600438 Arabidopsis thaliana
AT1G68290 2.0kb downstream 2.0kb downstream 2000 false Chr1: 25598439-25600438 Arabidopsis thaliana
AT1G68290 5.0kb upstream 5.0kb upstream 6768 true Chr1: 25591671-25598438 Arabidopsis thaliana
AT1G68290 5.0kb upstream 5.0kb upstream 5000 false Chr1: 25591671-25596670 Arabidopsis thaliana
AT1G68290 5.0kb downstream 5.0kb downstream 6768 true Chr1: 25596671-25603438 Arabidopsis thaliana
AT1G68290 5.0kb downstream 5.0kb downstream 5000 false Chr1: 25598439-25603438 Arabidopsis thaliana
AT1G68290 10.0kb upstream 10.0kb upstream 11768 true Chr1: 25586671-25598438 Arabidopsis thaliana
AT1G68290 10.0kb upstream 10.0kb upstream 10000 false Chr1: 25586671-25596670 Arabidopsis thaliana
AT1G68290 10.0kb downstream 10.0kb downstream 11768 true Chr1: 25596671-25608438 Arabidopsis thaliana
AT1G68290 10.0kb downstream 10.0kb downstream 10000 false Chr1: 25598439-25608438 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372544 5261 Brassicaceae View MSA
123833705 5264 Brassicales-Malvales View MSA
124337203 5266 SBM View MSA
124237582 5268 Malvidae View MSA
124063537 5270 Rosid View MSA
123736876 5271 Pentapetalae View MSA
122792403 5272 Eudicot View MSA
122042879 5273 Angiosperm View MSA
121350439 5274 Embryophyte View MSA
123381732 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.126     Low Low
cufflinks 0.129     Low Low
cufflinks 0.231     Low  
cufflinks 0.192     Low  
cufflinks 0.339       High
cufflinks 0.177     Low  

0 Strain