Gene : AT1G66430 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10584:SF181 - PUTATIVE-RELATED Genomic Order:  5578
Name:  ? AT1G66430 Secondary Identifier:  ? PAC:19650001
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-3801 Arabidopsis thaliana pathologic  
Athaliana PWY-4101 Arabidopsis thaliana pathologic  
Athaliana PWY-621 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G66430 0.5kb upstream 0.5kb upstream 2859 true Chr1: 24777771-24780629 Arabidopsis thaliana
AT1G66430 0.5kb upstream 0.5kb upstream 500 false Chr1: 24777771-24778270 Arabidopsis thaliana
AT1G66430 0.5kb downstream 0.5kb downstream 2859 true Chr1: 24778271-24781129 Arabidopsis thaliana
AT1G66430 0.5kb downstream 0.5kb downstream 500 false Chr1: 24780630-24781129 Arabidopsis thaliana
AT1G66430 1.0kb upstream 1.0kb upstream 3359 true Chr1: 24777271-24780629 Arabidopsis thaliana
AT1G66430 1.0kb upstream 1.0kb upstream 1000 false Chr1: 24777271-24778270 Arabidopsis thaliana
AT1G66430 1.0kb downstream 1.0kb downstream 3359 true Chr1: 24778271-24781629 Arabidopsis thaliana
AT1G66430 1.0kb downstream 1.0kb downstream 1000 false Chr1: 24780630-24781629 Arabidopsis thaliana
AT1G66430 2.0kb upstream 2.0kb upstream 4359 true Chr1: 24776271-24780629 Arabidopsis thaliana
AT1G66430 2.0kb upstream 2.0kb upstream 2000 false Chr1: 24776271-24778270 Arabidopsis thaliana
AT1G66430 2.0kb downstream 2.0kb downstream 4359 true Chr1: 24778271-24782629 Arabidopsis thaliana
AT1G66430 2.0kb downstream 2.0kb downstream 2000 false Chr1: 24780630-24782629 Arabidopsis thaliana
AT1G66430 5.0kb upstream 5.0kb upstream 7359 true Chr1: 24773271-24780629 Arabidopsis thaliana
AT1G66430 5.0kb upstream 5.0kb upstream 5000 false Chr1: 24773271-24778270 Arabidopsis thaliana
AT1G66430 5.0kb downstream 5.0kb downstream 7359 true Chr1: 24778271-24785629 Arabidopsis thaliana
AT1G66430 5.0kb downstream 5.0kb downstream 5000 false Chr1: 24780630-24785629 Arabidopsis thaliana
AT1G66430 10.0kb upstream 10.0kb upstream 12359 true Chr1: 24768271-24780629 Arabidopsis thaliana
AT1G66430 10.0kb upstream 10.0kb upstream 10000 false Chr1: 24768271-24778270 Arabidopsis thaliana
AT1G66430 10.0kb downstream 10.0kb downstream 12359 true Chr1: 24778271-24790629 Arabidopsis thaliana
AT1G66430 10.0kb downstream 10.0kb downstream 10000 false Chr1: 24780630-24790629 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369310 5261 Brassicaceae View MSA
123830203 5264 Brassicales-Malvales View MSA
124337784 5266 SBM View MSA
124254064 5268 Malvidae View MSA
124069533 5270 Rosid View MSA
123742774 5271 Pentapetalae View MSA
122790590 5272 Eudicot View MSA
122045850 5273 Angiosperm View MSA
121350713 5274 Embryophyte View MSA
123424695 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.495     High High
cufflinks 14.55        
cufflinks 29.042     High  
cufflinks 11.63       Low
cufflinks 22.988        
cufflinks 19.224        

0 Strain