Gene : pde194 A. thaliana TAIR10
Primary Identifier:  ? AT1G66520 Defline:  (1 of 1) 2.1.2.9 - Methionyl-tRNA formyltransferase / transformylase
Genomic Order:  5588 Name:  ? AT1G66520
Secondary Identifier:  ? PAC:19652538
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G66520 0.5kb upstream 0.5kb upstream 3117 true Chr1: 24816128-24819244 Arabidopsis thaliana
AT1G66520 0.5kb upstream 0.5kb upstream 500 false Chr1: 24818745-24819244 Arabidopsis thaliana
AT1G66520 0.5kb downstream 0.5kb downstream 3117 true Chr1: 24815628-24818744 Arabidopsis thaliana
AT1G66520 0.5kb downstream 0.5kb downstream 500 false Chr1: 24815628-24816127 Arabidopsis thaliana
AT1G66520 1.0kb upstream 1.0kb upstream 3617 true Chr1: 24816128-24819744 Arabidopsis thaliana
AT1G66520 1.0kb upstream 1.0kb upstream 1000 false Chr1: 24818745-24819744 Arabidopsis thaliana
AT1G66520 1.0kb downstream 1.0kb downstream 3617 true Chr1: 24815128-24818744 Arabidopsis thaliana
AT1G66520 1.0kb downstream 1.0kb downstream 1000 false Chr1: 24815128-24816127 Arabidopsis thaliana
AT1G66520 2.0kb upstream 2.0kb upstream 4617 true Chr1: 24816128-24820744 Arabidopsis thaliana
AT1G66520 2.0kb upstream 2.0kb upstream 2000 false Chr1: 24818745-24820744 Arabidopsis thaliana
AT1G66520 2.0kb downstream 2.0kb downstream 4617 true Chr1: 24814128-24818744 Arabidopsis thaliana
AT1G66520 2.0kb downstream 2.0kb downstream 2000 false Chr1: 24814128-24816127 Arabidopsis thaliana
AT1G66520 5.0kb upstream 5.0kb upstream 7617 true Chr1: 24816128-24823744 Arabidopsis thaliana
AT1G66520 5.0kb upstream 5.0kb upstream 5000 false Chr1: 24818745-24823744 Arabidopsis thaliana
AT1G66520 5.0kb downstream 5.0kb downstream 7617 true Chr1: 24811128-24818744 Arabidopsis thaliana
AT1G66520 5.0kb downstream 5.0kb downstream 5000 false Chr1: 24811128-24816127 Arabidopsis thaliana
AT1G66520 10.0kb upstream 10.0kb upstream 12617 true Chr1: 24816128-24828744 Arabidopsis thaliana
AT1G66520 10.0kb upstream 10.0kb upstream 10000 false Chr1: 24818745-24828744 Arabidopsis thaliana
AT1G66520 10.0kb downstream 10.0kb downstream 12617 true Chr1: 24806128-24818744 Arabidopsis thaliana
AT1G66520 10.0kb downstream 10.0kb downstream 10000 false Chr1: 24806128-24816127 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365533 5261 Brassicaceae View MSA
123838701 5264 Brassicales-Malvales View MSA
124345793 5266 SBM View MSA
124240053 5268 Malvidae View MSA
124062394 5270 Rosid View MSA
123738191 5271 Pentapetalae View MSA
122785656 5272 Eudicot View MSA
122045995 5273 Angiosperm View MSA
121347614 5274 Embryophyte View MSA
123426075 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.284       High
cufflinks 1.762        
cufflinks 3.622        
cufflinks 2.058        
cufflinks 2.578        
cufflinks 1.679       Low

0 Strain