Gene : AT1G66080 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12925:SF0 - PROTEIN HIKESHI Genomic Order:  5539
Name:  ? AT1G66080 Secondary Identifier:  ? PAC:19657664
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G66080 0.5kb upstream 0.5kb upstream 1441 true Chr1: 24600217-24601657 Arabidopsis thaliana
AT1G66080 0.5kb upstream 0.5kb upstream 500 false Chr1: 24601158-24601657 Arabidopsis thaliana
AT1G66080 0.5kb downstream 0.5kb downstream 1441 true Chr1: 24599717-24601157 Arabidopsis thaliana
AT1G66080 0.5kb downstream 0.5kb downstream 500 false Chr1: 24599717-24600216 Arabidopsis thaliana
AT1G66080 1.0kb upstream 1.0kb upstream 1941 true Chr1: 24600217-24602157 Arabidopsis thaliana
AT1G66080 1.0kb upstream 1.0kb upstream 1000 false Chr1: 24601158-24602157 Arabidopsis thaliana
AT1G66080 1.0kb downstream 1.0kb downstream 1941 true Chr1: 24599217-24601157 Arabidopsis thaliana
AT1G66080 1.0kb downstream 1.0kb downstream 1000 false Chr1: 24599217-24600216 Arabidopsis thaliana
AT1G66080 2.0kb upstream 2.0kb upstream 2941 true Chr1: 24600217-24603157 Arabidopsis thaliana
AT1G66080 2.0kb upstream 2.0kb upstream 2000 false Chr1: 24601158-24603157 Arabidopsis thaliana
AT1G66080 2.0kb downstream 2.0kb downstream 2941 true Chr1: 24598217-24601157 Arabidopsis thaliana
AT1G66080 2.0kb downstream 2.0kb downstream 2000 false Chr1: 24598217-24600216 Arabidopsis thaliana
AT1G66080 5.0kb upstream 5.0kb upstream 5941 true Chr1: 24600217-24606157 Arabidopsis thaliana
AT1G66080 5.0kb upstream 5.0kb upstream 5000 false Chr1: 24601158-24606157 Arabidopsis thaliana
AT1G66080 5.0kb downstream 5.0kb downstream 5941 true Chr1: 24595217-24601157 Arabidopsis thaliana
AT1G66080 5.0kb downstream 5.0kb downstream 5000 false Chr1: 24595217-24600216 Arabidopsis thaliana
AT1G66080 10.0kb upstream 10.0kb upstream 10941 true Chr1: 24600217-24611157 Arabidopsis thaliana
AT1G66080 10.0kb upstream 10.0kb upstream 10000 false Chr1: 24601158-24611157 Arabidopsis thaliana
AT1G66080 10.0kb downstream 10.0kb downstream 10941 true Chr1: 24590217-24601157 Arabidopsis thaliana
AT1G66080 10.0kb downstream 10.0kb downstream 10000 false Chr1: 24590217-24600216 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372475 5261 Brassicaceae View MSA
123832770 5264 Brassicales-Malvales View MSA
124339512 5266 SBM View MSA
124251029 5268 Malvidae View MSA
124064683 5270 Rosid View MSA
123740283 5271 Pentapetalae View MSA
122791850 5272 Eudicot View MSA
122044077 5273 Angiosperm View MSA
121345488 5274 Embryophyte View MSA
123425277 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.595        
cufflinks 21.354       High
cufflinks 3.984       Low
cufflinks 17.506        
cufflinks 3.672       Low
cufflinks 18.236        

0 Strain