Gene : AT1G66090 A. thaliana TAIR10
Defline:  (1 of 15) PF00931//PF13676 - NB-ARC domain (NB-ARC) // TIR domain (TIR_2) Genomic Order:  5540
Name:  ? AT1G66090 Secondary Identifier:  ? PAC:19649808
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G66090 0.5kb upstream 0.5kb upstream 3118 true Chr1: 24601646-24604763 Arabidopsis thaliana
AT1G66090 0.5kb upstream 0.5kb upstream 500 false Chr1: 24601646-24602145 Arabidopsis thaliana
AT1G66090 0.5kb downstream 0.5kb downstream 3118 true Chr1: 24602146-24605263 Arabidopsis thaliana
AT1G66090 0.5kb downstream 0.5kb downstream 500 false Chr1: 24604764-24605263 Arabidopsis thaliana
AT1G66090 1.0kb upstream 1.0kb upstream 3618 true Chr1: 24601146-24604763 Arabidopsis thaliana
AT1G66090 1.0kb upstream 1.0kb upstream 1000 false Chr1: 24601146-24602145 Arabidopsis thaliana
AT1G66090 1.0kb downstream 1.0kb downstream 3618 true Chr1: 24602146-24605763 Arabidopsis thaliana
AT1G66090 1.0kb downstream 1.0kb downstream 1000 false Chr1: 24604764-24605763 Arabidopsis thaliana
AT1G66090 2.0kb upstream 2.0kb upstream 4618 true Chr1: 24600146-24604763 Arabidopsis thaliana
AT1G66090 2.0kb upstream 2.0kb upstream 2000 false Chr1: 24600146-24602145 Arabidopsis thaliana
AT1G66090 2.0kb downstream 2.0kb downstream 4618 true Chr1: 24602146-24606763 Arabidopsis thaliana
AT1G66090 2.0kb downstream 2.0kb downstream 2000 false Chr1: 24604764-24606763 Arabidopsis thaliana
AT1G66090 5.0kb upstream 5.0kb upstream 7618 true Chr1: 24597146-24604763 Arabidopsis thaliana
AT1G66090 5.0kb upstream 5.0kb upstream 5000 false Chr1: 24597146-24602145 Arabidopsis thaliana
AT1G66090 5.0kb downstream 5.0kb downstream 7618 true Chr1: 24602146-24609763 Arabidopsis thaliana
AT1G66090 5.0kb downstream 5.0kb downstream 5000 false Chr1: 24604764-24609763 Arabidopsis thaliana
AT1G66090 10.0kb upstream 10.0kb upstream 12618 true Chr1: 24592146-24604763 Arabidopsis thaliana
AT1G66090 10.0kb upstream 10.0kb upstream 10000 false Chr1: 24592146-24602145 Arabidopsis thaliana
AT1G66090 10.0kb downstream 10.0kb downstream 12618 true Chr1: 24602146-24614763 Arabidopsis thaliana
AT1G66090 10.0kb downstream 10.0kb downstream 10000 false Chr1: 24604764-24614763 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381977 5261 Brassicaceae View MSA
123803577 5264 Brassicales-Malvales View MSA
124300675 5266 SBM View MSA
124254498 5268 Malvidae View MSA
124074947 5270 Rosid View MSA
123753572 5271 Pentapetalae View MSA
122797897 5272 Eudicot View MSA
122051706 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.785       High
cufflinks 11.983        
cufflinks 11.929        
cufflinks 5.429        
cufflinks 6.601        
cufflinks 5.741        

0 Strain