Gene : AT1G65560 A. thaliana TAIR10
Defline:  (1 of 1) 1.1.1.54//1.3.1.102 - Allyl-alcohol dehydrogenase // 2-alkenal reductase (NADP(+)) / NADPH-dependent alkenal/one oxidoreductase Genomic Order:  5487
Name:  ? AT1G65560 Secondary Identifier:  ? PAC:19656262
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G65560 0.5kb upstream 0.5kb upstream 2912 true Chr1: 24371387-24374298 Arabidopsis thaliana
AT1G65560 0.5kb upstream 0.5kb upstream 500 false Chr1: 24373799-24374298 Arabidopsis thaliana
AT1G65560 0.5kb downstream 0.5kb downstream 2912 true Chr1: 24370887-24373798 Arabidopsis thaliana
AT1G65560 0.5kb downstream 0.5kb downstream 500 false Chr1: 24370887-24371386 Arabidopsis thaliana
AT1G65560 1.0kb upstream 1.0kb upstream 3412 true Chr1: 24371387-24374798 Arabidopsis thaliana
AT1G65560 1.0kb upstream 1.0kb upstream 1000 false Chr1: 24373799-24374798 Arabidopsis thaliana
AT1G65560 1.0kb downstream 1.0kb downstream 3412 true Chr1: 24370387-24373798 Arabidopsis thaliana
AT1G65560 1.0kb downstream 1.0kb downstream 1000 false Chr1: 24370387-24371386 Arabidopsis thaliana
AT1G65560 2.0kb upstream 2.0kb upstream 4412 true Chr1: 24371387-24375798 Arabidopsis thaliana
AT1G65560 2.0kb upstream 2.0kb upstream 2000 false Chr1: 24373799-24375798 Arabidopsis thaliana
AT1G65560 2.0kb downstream 2.0kb downstream 4412 true Chr1: 24369387-24373798 Arabidopsis thaliana
AT1G65560 2.0kb downstream 2.0kb downstream 2000 false Chr1: 24369387-24371386 Arabidopsis thaliana
AT1G65560 5.0kb upstream 5.0kb upstream 7412 true Chr1: 24371387-24378798 Arabidopsis thaliana
AT1G65560 5.0kb upstream 5.0kb upstream 5000 false Chr1: 24373799-24378798 Arabidopsis thaliana
AT1G65560 5.0kb downstream 5.0kb downstream 7412 true Chr1: 24366387-24373798 Arabidopsis thaliana
AT1G65560 5.0kb downstream 5.0kb downstream 5000 false Chr1: 24366387-24371386 Arabidopsis thaliana
AT1G65560 10.0kb upstream 10.0kb upstream 12412 true Chr1: 24371387-24383798 Arabidopsis thaliana
AT1G65560 10.0kb upstream 10.0kb upstream 10000 false Chr1: 24373799-24383798 Arabidopsis thaliana
AT1G65560 10.0kb downstream 10.0kb downstream 12412 true Chr1: 24361387-24373798 Arabidopsis thaliana
AT1G65560 10.0kb downstream 10.0kb downstream 10000 false Chr1: 24361387-24371386 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373890 5261 Brassicaceae View MSA
123829605 5264 Brassicales-Malvales View MSA
124321611 5266 SBM View MSA
124238470 5268 Malvidae View MSA
124065367 5270 Rosid View MSA
123739652 5271 Pentapetalae View MSA
122790744 5272 Eudicot View MSA
122046784 5273 Angiosperm View MSA
121350474 5274 Embryophyte View MSA
123428381 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.161        
cufflinks 5.534       High
cufflinks 1.868       Low
cufflinks 4.286        
cufflinks 1.783       Low
cufflinks 5.145        

0 Strain