Gene : AT1G65020 A. thaliana TAIR10
Defline:  (1 of 1) PF08378 - Nuclease-related domain (NERD) Genomic Order:  5426
Name:  ? AT1G65020 Secondary Identifier:  ? PAC:19653100
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G65020 0.5kb upstream 0.5kb upstream 2762 true Chr1: 24154344-24157105 Arabidopsis thaliana
AT1G65020 0.5kb upstream 0.5kb upstream 500 false Chr1: 24156606-24157105 Arabidopsis thaliana
AT1G65020 0.5kb downstream 0.5kb downstream 2762 true Chr1: 24153844-24156605 Arabidopsis thaliana
AT1G65020 0.5kb downstream 0.5kb downstream 500 false Chr1: 24153844-24154343 Arabidopsis thaliana
AT1G65020 1.0kb upstream 1.0kb upstream 3262 true Chr1: 24154344-24157605 Arabidopsis thaliana
AT1G65020 1.0kb upstream 1.0kb upstream 1000 false Chr1: 24156606-24157605 Arabidopsis thaliana
AT1G65020 1.0kb downstream 1.0kb downstream 3262 true Chr1: 24153344-24156605 Arabidopsis thaliana
AT1G65020 1.0kb downstream 1.0kb downstream 1000 false Chr1: 24153344-24154343 Arabidopsis thaliana
AT1G65020 2.0kb upstream 2.0kb upstream 4262 true Chr1: 24154344-24158605 Arabidopsis thaliana
AT1G65020 2.0kb upstream 2.0kb upstream 2000 false Chr1: 24156606-24158605 Arabidopsis thaliana
AT1G65020 2.0kb downstream 2.0kb downstream 4262 true Chr1: 24152344-24156605 Arabidopsis thaliana
AT1G65020 2.0kb downstream 2.0kb downstream 2000 false Chr1: 24152344-24154343 Arabidopsis thaliana
AT1G65020 5.0kb upstream 5.0kb upstream 7262 true Chr1: 24154344-24161605 Arabidopsis thaliana
AT1G65020 5.0kb upstream 5.0kb upstream 5000 false Chr1: 24156606-24161605 Arabidopsis thaliana
AT1G65020 5.0kb downstream 5.0kb downstream 7262 true Chr1: 24149344-24156605 Arabidopsis thaliana
AT1G65020 5.0kb downstream 5.0kb downstream 5000 false Chr1: 24149344-24154343 Arabidopsis thaliana
AT1G65020 10.0kb upstream 10.0kb upstream 12262 true Chr1: 24154344-24166605 Arabidopsis thaliana
AT1G65020 10.0kb upstream 10.0kb upstream 10000 false Chr1: 24156606-24166605 Arabidopsis thaliana
AT1G65020 10.0kb downstream 10.0kb downstream 12262 true Chr1: 24144344-24156605 Arabidopsis thaliana
AT1G65020 10.0kb downstream 10.0kb downstream 10000 false Chr1: 24144344-24154343 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041014 5273 Angiosperm View MSA
122375260 5261 Brassicaceae View MSA
123836444 5264 Brassicales-Malvales View MSA
124340077 5266 SBM View MSA
124244348 5268 Malvidae View MSA
124065575 5270 Rosid View MSA
123737845 5271 Pentapetalae View MSA
122786817 5272 Eudicot View MSA
121347889 5274 Embryophyte View MSA
123380667 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.493        
cufflinks 13.299        
cufflinks 7.901       Low
cufflinks 13.547       High
cufflinks 8.556        
cufflinks 11.82        

0 Strain