Gene : PTAC4 A. thaliana TAIR10
Primary Identifier:  ? AT1G65260 Defline:  (1 of 1) K03969 - phage shock protein A (pspA)
Genomic Order:  5451 Name:  ? AT1G65260
Secondary Identifier:  ? PAC:19651043
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G65260 0.5kb upstream 0.5kb upstream 4948 true Chr1: 24235758-24240705 Arabidopsis thaliana
AT1G65260 0.5kb upstream 0.5kb upstream 500 false Chr1: 24235758-24236257 Arabidopsis thaliana
AT1G65260 0.5kb downstream 0.5kb downstream 4948 true Chr1: 24236258-24241205 Arabidopsis thaliana
AT1G65260 0.5kb downstream 0.5kb downstream 500 false Chr1: 24240706-24241205 Arabidopsis thaliana
AT1G65260 1.0kb upstream 1.0kb upstream 5448 true Chr1: 24235258-24240705 Arabidopsis thaliana
AT1G65260 1.0kb upstream 1.0kb upstream 1000 false Chr1: 24235258-24236257 Arabidopsis thaliana
AT1G65260 1.0kb downstream 1.0kb downstream 5448 true Chr1: 24236258-24241705 Arabidopsis thaliana
AT1G65260 1.0kb downstream 1.0kb downstream 1000 false Chr1: 24240706-24241705 Arabidopsis thaliana
AT1G65260 2.0kb upstream 2.0kb upstream 6448 true Chr1: 24234258-24240705 Arabidopsis thaliana
AT1G65260 2.0kb upstream 2.0kb upstream 2000 false Chr1: 24234258-24236257 Arabidopsis thaliana
AT1G65260 2.0kb downstream 2.0kb downstream 6448 true Chr1: 24236258-24242705 Arabidopsis thaliana
AT1G65260 2.0kb downstream 2.0kb downstream 2000 false Chr1: 24240706-24242705 Arabidopsis thaliana
AT1G65260 5.0kb upstream 5.0kb upstream 9448 true Chr1: 24231258-24240705 Arabidopsis thaliana
AT1G65260 5.0kb upstream 5.0kb upstream 5000 false Chr1: 24231258-24236257 Arabidopsis thaliana
AT1G65260 5.0kb downstream 5.0kb downstream 9448 true Chr1: 24236258-24245705 Arabidopsis thaliana
AT1G65260 5.0kb downstream 5.0kb downstream 5000 false Chr1: 24240706-24245705 Arabidopsis thaliana
AT1G65260 10.0kb upstream 10.0kb upstream 14448 true Chr1: 24226258-24240705 Arabidopsis thaliana
AT1G65260 10.0kb upstream 10.0kb upstream 10000 false Chr1: 24226258-24236257 Arabidopsis thaliana
AT1G65260 10.0kb downstream 10.0kb downstream 14448 true Chr1: 24236258-24250705 Arabidopsis thaliana
AT1G65260 10.0kb downstream 10.0kb downstream 10000 false Chr1: 24240706-24250705 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364763 5261 Brassicaceae View MSA
123837914 5264 Brassicales-Malvales View MSA
124337545 5266 SBM View MSA
124237232 5268 Malvidae View MSA
124067961 5270 Rosid View MSA
123738548 5271 Pentapetalae View MSA
122792154 5272 Eudicot View MSA
122046010 5273 Angiosperm View MSA
121345792 5274 Embryophyte View MSA
123427031 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.051     High  
cufflinks 6.593        
cufflinks 53.068     High  
cufflinks 6.676        
cufflinks 53.725     High High
cufflinks 5.115       Low

0 Strain