Gene : AT1G64620 A. thaliana TAIR10
Defline:  (1 of 36) PF02701 - Dof domain, zinc finger (zf-Dof) Genomic Order:  5385
Name:  ? AT1G64620 Secondary Identifier:  ? PAC:19655314
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G64620 0.5kb upstream 0.5kb upstream 2203 true Chr1: 24006492-24008694 Arabidopsis thaliana
AT1G64620 0.5kb upstream 0.5kb upstream 500 false Chr1: 24006492-24006991 Arabidopsis thaliana
AT1G64620 0.5kb downstream 0.5kb downstream 2203 true Chr1: 24006992-24009194 Arabidopsis thaliana
AT1G64620 0.5kb downstream 0.5kb downstream 500 false Chr1: 24008695-24009194 Arabidopsis thaliana
AT1G64620 1.0kb upstream 1.0kb upstream 2703 true Chr1: 24005992-24008694 Arabidopsis thaliana
AT1G64620 1.0kb upstream 1.0kb upstream 1000 false Chr1: 24005992-24006991 Arabidopsis thaliana
AT1G64620 1.0kb downstream 1.0kb downstream 2703 true Chr1: 24006992-24009694 Arabidopsis thaliana
AT1G64620 1.0kb downstream 1.0kb downstream 1000 false Chr1: 24008695-24009694 Arabidopsis thaliana
AT1G64620 2.0kb upstream 2.0kb upstream 3703 true Chr1: 24004992-24008694 Arabidopsis thaliana
AT1G64620 2.0kb upstream 2.0kb upstream 2000 false Chr1: 24004992-24006991 Arabidopsis thaliana
AT1G64620 2.0kb downstream 2.0kb downstream 3703 true Chr1: 24006992-24010694 Arabidopsis thaliana
AT1G64620 2.0kb downstream 2.0kb downstream 2000 false Chr1: 24008695-24010694 Arabidopsis thaliana
AT1G64620 5.0kb upstream 5.0kb upstream 6703 true Chr1: 24001992-24008694 Arabidopsis thaliana
AT1G64620 5.0kb upstream 5.0kb upstream 5000 false Chr1: 24001992-24006991 Arabidopsis thaliana
AT1G64620 5.0kb downstream 5.0kb downstream 6703 true Chr1: 24006992-24013694 Arabidopsis thaliana
AT1G64620 5.0kb downstream 5.0kb downstream 5000 false Chr1: 24008695-24013694 Arabidopsis thaliana
AT1G64620 10.0kb upstream 10.0kb upstream 11703 true Chr1: 23996992-24008694 Arabidopsis thaliana
AT1G64620 10.0kb upstream 10.0kb upstream 10000 false Chr1: 23996992-24006991 Arabidopsis thaliana
AT1G64620 10.0kb downstream 10.0kb downstream 11703 true Chr1: 24006992-24018694 Arabidopsis thaliana
AT1G64620 10.0kb downstream 10.0kb downstream 10000 false Chr1: 24008695-24018694 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364026 5261 Brassicaceae View MSA
123798668 5264 Brassicales-Malvales View MSA
124296275 5266 SBM View MSA
124251121 5268 Malvidae View MSA
124070858 5270 Rosid View MSA
123748434 5271 Pentapetalae View MSA
122796456 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.871       Low
cufflinks 8.23        
cufflinks 2.732        
cufflinks 10.756       High
cufflinks 2.692        
cufflinks 7.575        

0 Strain