Gene : VHA-E3 A. thaliana TAIR10
Primary Identifier:  ? AT1G64200 Defline:  (1 of 3) K02150 - V-type H+-transporting ATPase subunit E (ATPeV1E, ATP6E)
Genomic Order:  5340 Name:  ? AT1G64200
Secondary Identifier:  ? PAC:19654567
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G64200 0.5kb upstream 0.5kb upstream 1977 true Chr1: 23828526-23830502 Arabidopsis thaliana
AT1G64200 0.5kb upstream 0.5kb upstream 500 false Chr1: 23830003-23830502 Arabidopsis thaliana
AT1G64200 0.5kb downstream 0.5kb downstream 1977 true Chr1: 23828026-23830002 Arabidopsis thaliana
AT1G64200 0.5kb downstream 0.5kb downstream 500 false Chr1: 23828026-23828525 Arabidopsis thaliana
AT1G64200 1.0kb upstream 1.0kb upstream 2477 true Chr1: 23828526-23831002 Arabidopsis thaliana
AT1G64200 1.0kb upstream 1.0kb upstream 1000 false Chr1: 23830003-23831002 Arabidopsis thaliana
AT1G64200 1.0kb downstream 1.0kb downstream 2477 true Chr1: 23827526-23830002 Arabidopsis thaliana
AT1G64200 1.0kb downstream 1.0kb downstream 1000 false Chr1: 23827526-23828525 Arabidopsis thaliana
AT1G64200 2.0kb upstream 2.0kb upstream 3477 true Chr1: 23828526-23832002 Arabidopsis thaliana
AT1G64200 2.0kb upstream 2.0kb upstream 2000 false Chr1: 23830003-23832002 Arabidopsis thaliana
AT1G64200 2.0kb downstream 2.0kb downstream 3477 true Chr1: 23826526-23830002 Arabidopsis thaliana
AT1G64200 2.0kb downstream 2.0kb downstream 2000 false Chr1: 23826526-23828525 Arabidopsis thaliana
AT1G64200 5.0kb upstream 5.0kb upstream 6477 true Chr1: 23828526-23835002 Arabidopsis thaliana
AT1G64200 5.0kb upstream 5.0kb upstream 5000 false Chr1: 23830003-23835002 Arabidopsis thaliana
AT1G64200 5.0kb downstream 5.0kb downstream 6477 true Chr1: 23823526-23830002 Arabidopsis thaliana
AT1G64200 5.0kb downstream 5.0kb downstream 5000 false Chr1: 23823526-23828525 Arabidopsis thaliana
AT1G64200 10.0kb upstream 10.0kb upstream 11477 true Chr1: 23828526-23840002 Arabidopsis thaliana
AT1G64200 10.0kb upstream 10.0kb upstream 10000 false Chr1: 23830003-23840002 Arabidopsis thaliana
AT1G64200 10.0kb downstream 10.0kb downstream 11477 true Chr1: 23818526-23830002 Arabidopsis thaliana
AT1G64200 10.0kb downstream 10.0kb downstream 10000 false Chr1: 23818526-23828525 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365506 5261 Brassicaceae View MSA
123838830 5264 Brassicales-Malvales View MSA
124343315 5266 SBM View MSA
124252976 5268 Malvidae View MSA
124072074 5270 Rosid View MSA
123749276 5271 Pentapetalae View MSA
122786311 5272 Eudicot View MSA
122044721 5273 Angiosperm View MSA
121345391 5274 Embryophyte View MSA
123424200 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.704       Low
cufflinks 19.141        
cufflinks 18.806        
cufflinks 26.975        
cufflinks 14.525        
cufflinks 33.003     High High

0 Strain