Gene : AT1G64160 A. thaliana TAIR10
Defline:  (1 of 5) PTHR21495//PTHR21495:SF40 - NUCLEOPORIN-RELATED // DIRIGENT PROTEIN 12-RELATED Genomic Order:  5334
Name:  ? AT1G64160 Secondary Identifier:  ? PAC:19653378
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G64160 0.5kb upstream 0.5kb upstream 1330 true Chr1: 23813510-23814839 Arabidopsis thaliana
AT1G64160 0.5kb upstream 0.5kb upstream 500 false Chr1: 23813510-23814009 Arabidopsis thaliana
AT1G64160 0.5kb downstream 0.5kb downstream 1330 true Chr1: 23814010-23815339 Arabidopsis thaliana
AT1G64160 0.5kb downstream 0.5kb downstream 500 false Chr1: 23814840-23815339 Arabidopsis thaliana
AT1G64160 1.0kb upstream 1.0kb upstream 1830 true Chr1: 23813010-23814839 Arabidopsis thaliana
AT1G64160 1.0kb upstream 1.0kb upstream 1000 false Chr1: 23813010-23814009 Arabidopsis thaliana
AT1G64160 1.0kb downstream 1.0kb downstream 1830 true Chr1: 23814010-23815839 Arabidopsis thaliana
AT1G64160 1.0kb downstream 1.0kb downstream 1000 false Chr1: 23814840-23815839 Arabidopsis thaliana
AT1G64160 2.0kb upstream 2.0kb upstream 2830 true Chr1: 23812010-23814839 Arabidopsis thaliana
AT1G64160 2.0kb upstream 2.0kb upstream 2000 false Chr1: 23812010-23814009 Arabidopsis thaliana
AT1G64160 2.0kb downstream 2.0kb downstream 2830 true Chr1: 23814010-23816839 Arabidopsis thaliana
AT1G64160 2.0kb downstream 2.0kb downstream 2000 false Chr1: 23814840-23816839 Arabidopsis thaliana
AT1G64160 5.0kb upstream 5.0kb upstream 5830 true Chr1: 23809010-23814839 Arabidopsis thaliana
AT1G64160 5.0kb upstream 5.0kb upstream 5000 false Chr1: 23809010-23814009 Arabidopsis thaliana
AT1G64160 5.0kb downstream 5.0kb downstream 5830 true Chr1: 23814010-23819839 Arabidopsis thaliana
AT1G64160 5.0kb downstream 5.0kb downstream 5000 false Chr1: 23814840-23819839 Arabidopsis thaliana
AT1G64160 10.0kb upstream 10.0kb upstream 10830 true Chr1: 23804010-23814839 Arabidopsis thaliana
AT1G64160 10.0kb upstream 10.0kb upstream 10000 false Chr1: 23804010-23814009 Arabidopsis thaliana
AT1G64160 10.0kb downstream 10.0kb downstream 10830 true Chr1: 23814010-23824839 Arabidopsis thaliana
AT1G64160 10.0kb downstream 10.0kb downstream 10000 false Chr1: 23814840-23824839 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378392 5261 Brassicaceae View MSA
123839086 5264 Brassicales-Malvales View MSA
124348293 5266 SBM View MSA
124245400 5268 Malvidae View MSA
124071595 5270 Rosid View MSA
123748971 5271 Pentapetalae View MSA
122793994 5272 Eudicot View MSA
122050560 5273 Angiosperm View MSA
121351582 5274 Embryophyte View MSA
123382236 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.016     Low Low
cufflinks 3.023        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 15.034        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.435        

0 Strain