Gene : AT2G26800 A. thaliana TAIR10
Defline:  (1 of 1) 4.1.3.4 - Hydroxymethylglutaryl-CoA lyase / HMG-CoA lyase Genomic Order:  1958
Name:  ? AT2G26800 Secondary Identifier:  ? PAC:19639187
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana LEU-DEG2-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G26800 0.5kb upstream 0.5kb upstream 4211 true Chr2: 11429022-11433232 Arabidopsis thaliana
AT2G26800 0.5kb upstream 0.5kb upstream 500 false Chr2: 11432733-11433232 Arabidopsis thaliana
AT2G26800 0.5kb downstream 0.5kb downstream 4211 true Chr2: 11428522-11432732 Arabidopsis thaliana
AT2G26800 0.5kb downstream 0.5kb downstream 500 false Chr2: 11428522-11429021 Arabidopsis thaliana
AT2G26800 1.0kb upstream 1.0kb upstream 4711 true Chr2: 11429022-11433732 Arabidopsis thaliana
AT2G26800 1.0kb upstream 1.0kb upstream 1000 false Chr2: 11432733-11433732 Arabidopsis thaliana
AT2G26800 1.0kb downstream 1.0kb downstream 4711 true Chr2: 11428022-11432732 Arabidopsis thaliana
AT2G26800 1.0kb downstream 1.0kb downstream 1000 false Chr2: 11428022-11429021 Arabidopsis thaliana
AT2G26800 2.0kb upstream 2.0kb upstream 5711 true Chr2: 11429022-11434732 Arabidopsis thaliana
AT2G26800 2.0kb upstream 2.0kb upstream 2000 false Chr2: 11432733-11434732 Arabidopsis thaliana
AT2G26800 2.0kb downstream 2.0kb downstream 5711 true Chr2: 11427022-11432732 Arabidopsis thaliana
AT2G26800 2.0kb downstream 2.0kb downstream 2000 false Chr2: 11427022-11429021 Arabidopsis thaliana
AT2G26800 5.0kb upstream 5.0kb upstream 8711 true Chr2: 11429022-11437732 Arabidopsis thaliana
AT2G26800 5.0kb upstream 5.0kb upstream 5000 false Chr2: 11432733-11437732 Arabidopsis thaliana
AT2G26800 5.0kb downstream 5.0kb downstream 8711 true Chr2: 11424022-11432732 Arabidopsis thaliana
AT2G26800 5.0kb downstream 5.0kb downstream 5000 false Chr2: 11424022-11429021 Arabidopsis thaliana
AT2G26800 10.0kb upstream 10.0kb upstream 13711 true Chr2: 11429022-11442732 Arabidopsis thaliana
AT2G26800 10.0kb upstream 10.0kb upstream 10000 false Chr2: 11432733-11442732 Arabidopsis thaliana
AT2G26800 10.0kb downstream 10.0kb downstream 13711 true Chr2: 11419022-11432732 Arabidopsis thaliana
AT2G26800 10.0kb downstream 10.0kb downstream 10000 false Chr2: 11419022-11429021 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364667 5261 Brassicaceae View MSA
123834510 5264 Brassicales-Malvales View MSA
124345181 5266 SBM View MSA
124245610 5268 Malvidae View MSA
124074648 5270 Rosid View MSA
123743387 5271 Pentapetalae View MSA
122790168 5272 Eudicot View MSA
122045409 5273 Angiosperm View MSA
121347999 5274 Embryophyte View MSA
123426187 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.932        
cufflinks 2.089       Low
cufflinks 3.392        
cufflinks 2.988        
cufflinks 4.324       High
cufflinks 2.37        

0 Strain