Gene : AT2G26790 A. thaliana TAIR10
Defline:  (1 of 32) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  1957
Name:  ? AT2G26790 Secondary Identifier:  ? PAC:19639727
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G26790 0.5kb upstream 0.5kb upstream 2900 true Chr2: 11425270-11428169 Arabidopsis thaliana
AT2G26790 0.5kb upstream 0.5kb upstream 500 false Chr2: 11427670-11428169 Arabidopsis thaliana
AT2G26790 0.5kb downstream 0.5kb downstream 2900 true Chr2: 11424770-11427669 Arabidopsis thaliana
AT2G26790 0.5kb downstream 0.5kb downstream 500 false Chr2: 11424770-11425269 Arabidopsis thaliana
AT2G26790 1.0kb upstream 1.0kb upstream 3400 true Chr2: 11425270-11428669 Arabidopsis thaliana
AT2G26790 1.0kb upstream 1.0kb upstream 1000 false Chr2: 11427670-11428669 Arabidopsis thaliana
AT2G26790 1.0kb downstream 1.0kb downstream 3400 true Chr2: 11424270-11427669 Arabidopsis thaliana
AT2G26790 1.0kb downstream 1.0kb downstream 1000 false Chr2: 11424270-11425269 Arabidopsis thaliana
AT2G26790 2.0kb upstream 2.0kb upstream 4400 true Chr2: 11425270-11429669 Arabidopsis thaliana
AT2G26790 2.0kb upstream 2.0kb upstream 2000 false Chr2: 11427670-11429669 Arabidopsis thaliana
AT2G26790 2.0kb downstream 2.0kb downstream 4400 true Chr2: 11423270-11427669 Arabidopsis thaliana
AT2G26790 2.0kb downstream 2.0kb downstream 2000 false Chr2: 11423270-11425269 Arabidopsis thaliana
AT2G26790 5.0kb upstream 5.0kb upstream 7400 true Chr2: 11425270-11432669 Arabidopsis thaliana
AT2G26790 5.0kb upstream 5.0kb upstream 5000 false Chr2: 11427670-11432669 Arabidopsis thaliana
AT2G26790 5.0kb downstream 5.0kb downstream 7400 true Chr2: 11420270-11427669 Arabidopsis thaliana
AT2G26790 5.0kb downstream 5.0kb downstream 5000 false Chr2: 11420270-11425269 Arabidopsis thaliana
AT2G26790 10.0kb upstream 10.0kb upstream 12400 true Chr2: 11425270-11437669 Arabidopsis thaliana
AT2G26790 10.0kb upstream 10.0kb upstream 10000 false Chr2: 11427670-11437669 Arabidopsis thaliana
AT2G26790 10.0kb downstream 10.0kb downstream 12400 true Chr2: 11415270-11427669 Arabidopsis thaliana
AT2G26790 10.0kb downstream 10.0kb downstream 10000 false Chr2: 11415270-11425269 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370206 5261 Brassicaceae View MSA
123828334 5264 Brassicales-Malvales View MSA
124343767 5266 SBM View MSA
124243601 5268 Malvidae View MSA
124065007 5270 Rosid View MSA
123750862 5271 Pentapetalae View MSA
122792992 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.196        
cufflinks 1.416        
cufflinks 0.964        
cufflinks 1.627       High
cufflinks 0.802       Low
cufflinks 1.462        

0 Strain