Gene : TED4 A. thaliana TAIR10
Primary Identifier:  ? AT2G26670 Defline:  (1 of 3) K00510 - heme oxygenase (HMOX, hmuO, ho)
Genomic Order:  1944 Name:  ? AT2G26670
Secondary Identifier:  ? PAC:19638749
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5874 Arabidopsis thaliana pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G26670 0.5kb upstream 0.5kb upstream 2389 true Chr2: 11341184-11343572 Arabidopsis thaliana
AT2G26670 0.5kb upstream 0.5kb upstream 500 false Chr2: 11341184-11341683 Arabidopsis thaliana
AT2G26670 0.5kb downstream 0.5kb downstream 2389 true Chr2: 11341684-11344072 Arabidopsis thaliana
AT2G26670 0.5kb downstream 0.5kb downstream 500 false Chr2: 11343573-11344072 Arabidopsis thaliana
AT2G26670 1.0kb upstream 1.0kb upstream 2889 true Chr2: 11340684-11343572 Arabidopsis thaliana
AT2G26670 1.0kb upstream 1.0kb upstream 1000 false Chr2: 11340684-11341683 Arabidopsis thaliana
AT2G26670 1.0kb downstream 1.0kb downstream 2889 true Chr2: 11341684-11344572 Arabidopsis thaliana
AT2G26670 1.0kb downstream 1.0kb downstream 1000 false Chr2: 11343573-11344572 Arabidopsis thaliana
AT2G26670 2.0kb upstream 2.0kb upstream 3889 true Chr2: 11339684-11343572 Arabidopsis thaliana
AT2G26670 2.0kb upstream 2.0kb upstream 2000 false Chr2: 11339684-11341683 Arabidopsis thaliana
AT2G26670 2.0kb downstream 2.0kb downstream 3889 true Chr2: 11341684-11345572 Arabidopsis thaliana
AT2G26670 2.0kb downstream 2.0kb downstream 2000 false Chr2: 11343573-11345572 Arabidopsis thaliana
AT2G26670 5.0kb upstream 5.0kb upstream 6889 true Chr2: 11336684-11343572 Arabidopsis thaliana
AT2G26670 5.0kb upstream 5.0kb upstream 5000 false Chr2: 11336684-11341683 Arabidopsis thaliana
AT2G26670 5.0kb downstream 5.0kb downstream 6889 true Chr2: 11341684-11348572 Arabidopsis thaliana
AT2G26670 5.0kb downstream 5.0kb downstream 5000 false Chr2: 11343573-11348572 Arabidopsis thaliana
AT2G26670 10.0kb upstream 10.0kb upstream 11889 true Chr2: 11331684-11343572 Arabidopsis thaliana
AT2G26670 10.0kb upstream 10.0kb upstream 10000 false Chr2: 11331684-11341683 Arabidopsis thaliana
AT2G26670 10.0kb downstream 10.0kb downstream 11889 true Chr2: 11341684-11353572 Arabidopsis thaliana
AT2G26670 10.0kb downstream 10.0kb downstream 10000 false Chr2: 11343573-11353572 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378474 5261 Brassicaceae View MSA
123837590 5264 Brassicales-Malvales View MSA
124338986 5266 SBM View MSA
124253166 5268 Malvidae View MSA
124067644 5270 Rosid View MSA
123739396 5271 Pentapetalae View MSA
122788325 5272 Eudicot View MSA
122047622 5273 Angiosperm View MSA
121347679 5274 Embryophyte View MSA
123424297 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.101     High  
cufflinks 10.356       Low
cufflinks 38.09     High High
cufflinks 16.231        
cufflinks 34.886     High  
cufflinks 10.385       Low

0 Strain