Gene : RPN13 A. thaliana TAIR10
Primary Identifier:  ? AT2G26590 Defline:  (1 of 1) PTHR12225 - ADHESION REGULATING MOLECULE 1 110 KDA CELL MEMBRANE GLYCOPROTEIN
Genomic Order:  1937 Name:  ? AT2G26590
Secondary Identifier:  ? PAC:19639036
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G26590 0.5kb upstream 0.5kb upstream 4593 true Chr2: 11311004-11315596 Arabidopsis thaliana
AT2G26590 0.5kb upstream 0.5kb upstream 500 false Chr2: 11315097-11315596 Arabidopsis thaliana
AT2G26590 0.5kb downstream 0.5kb downstream 4593 true Chr2: 11310504-11315096 Arabidopsis thaliana
AT2G26590 0.5kb downstream 0.5kb downstream 500 false Chr2: 11310504-11311003 Arabidopsis thaliana
AT2G26590 1.0kb upstream 1.0kb upstream 5093 true Chr2: 11311004-11316096 Arabidopsis thaliana
AT2G26590 1.0kb upstream 1.0kb upstream 1000 false Chr2: 11315097-11316096 Arabidopsis thaliana
AT2G26590 1.0kb downstream 1.0kb downstream 5093 true Chr2: 11310004-11315096 Arabidopsis thaliana
AT2G26590 1.0kb downstream 1.0kb downstream 1000 false Chr2: 11310004-11311003 Arabidopsis thaliana
AT2G26590 2.0kb upstream 2.0kb upstream 6093 true Chr2: 11311004-11317096 Arabidopsis thaliana
AT2G26590 2.0kb upstream 2.0kb upstream 2000 false Chr2: 11315097-11317096 Arabidopsis thaliana
AT2G26590 2.0kb downstream 2.0kb downstream 6093 true Chr2: 11309004-11315096 Arabidopsis thaliana
AT2G26590 2.0kb downstream 2.0kb downstream 2000 false Chr2: 11309004-11311003 Arabidopsis thaliana
AT2G26590 5.0kb upstream 5.0kb upstream 9093 true Chr2: 11311004-11320096 Arabidopsis thaliana
AT2G26590 5.0kb upstream 5.0kb upstream 5000 false Chr2: 11315097-11320096 Arabidopsis thaliana
AT2G26590 5.0kb downstream 5.0kb downstream 9093 true Chr2: 11306004-11315096 Arabidopsis thaliana
AT2G26590 5.0kb downstream 5.0kb downstream 5000 false Chr2: 11306004-11311003 Arabidopsis thaliana
AT2G26590 10.0kb upstream 10.0kb upstream 14093 true Chr2: 11311004-11325096 Arabidopsis thaliana
AT2G26590 10.0kb upstream 10.0kb upstream 10000 false Chr2: 11315097-11325096 Arabidopsis thaliana
AT2G26590 10.0kb downstream 10.0kb downstream 14093 true Chr2: 11301004-11315096 Arabidopsis thaliana
AT2G26590 10.0kb downstream 10.0kb downstream 10000 false Chr2: 11301004-11311003 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041235 5273 Angiosperm View MSA
122373555 5261 Brassicaceae View MSA
123835074 5264 Brassicales-Malvales View MSA
124338587 5266 SBM View MSA
124236980 5268 Malvidae View MSA
124066938 5270 Rosid View MSA
123746054 5271 Pentapetalae View MSA
122790240 5272 Eudicot View MSA
121344087 5274 Embryophyte View MSA
123425149 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.375        
cufflinks 3.105        
cufflinks 2.048       Low
cufflinks 3.279        
cufflinks 2.081       Low
cufflinks 3.245        

0 Strain