Gene : AT2G25530 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12169//PTHR12169:SF5 - ATPASE N2B // AFG1-LIKE ATPASE FAMILY PROTEIN Genomic Order:  1826
Name:  ? AT2G25530 Secondary Identifier:  ? PAC:19638042
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G25530 0.5kb upstream 0.5kb upstream 4199 true Chr2: 10862559-10866757 Arabidopsis thaliana
AT2G25530 0.5kb upstream 0.5kb upstream 500 false Chr2: 10862559-10863058 Arabidopsis thaliana
AT2G25530 0.5kb downstream 0.5kb downstream 4199 true Chr2: 10863059-10867257 Arabidopsis thaliana
AT2G25530 0.5kb downstream 0.5kb downstream 500 false Chr2: 10866758-10867257 Arabidopsis thaliana
AT2G25530 1.0kb upstream 1.0kb upstream 4699 true Chr2: 10862059-10866757 Arabidopsis thaliana
AT2G25530 1.0kb upstream 1.0kb upstream 1000 false Chr2: 10862059-10863058 Arabidopsis thaliana
AT2G25530 1.0kb downstream 1.0kb downstream 4699 true Chr2: 10863059-10867757 Arabidopsis thaliana
AT2G25530 1.0kb downstream 1.0kb downstream 1000 false Chr2: 10866758-10867757 Arabidopsis thaliana
AT2G25530 2.0kb upstream 2.0kb upstream 5699 true Chr2: 10861059-10866757 Arabidopsis thaliana
AT2G25530 2.0kb upstream 2.0kb upstream 2000 false Chr2: 10861059-10863058 Arabidopsis thaliana
AT2G25530 2.0kb downstream 2.0kb downstream 5699 true Chr2: 10863059-10868757 Arabidopsis thaliana
AT2G25530 2.0kb downstream 2.0kb downstream 2000 false Chr2: 10866758-10868757 Arabidopsis thaliana
AT2G25530 5.0kb upstream 5.0kb upstream 8699 true Chr2: 10858059-10866757 Arabidopsis thaliana
AT2G25530 5.0kb upstream 5.0kb upstream 5000 false Chr2: 10858059-10863058 Arabidopsis thaliana
AT2G25530 5.0kb downstream 5.0kb downstream 8699 true Chr2: 10863059-10871757 Arabidopsis thaliana
AT2G25530 5.0kb downstream 5.0kb downstream 5000 false Chr2: 10866758-10871757 Arabidopsis thaliana
AT2G25530 10.0kb upstream 10.0kb upstream 13699 true Chr2: 10853059-10866757 Arabidopsis thaliana
AT2G25530 10.0kb upstream 10.0kb upstream 10000 false Chr2: 10853059-10863058 Arabidopsis thaliana
AT2G25530 10.0kb downstream 10.0kb downstream 13699 true Chr2: 10863059-10876757 Arabidopsis thaliana
AT2G25530 10.0kb downstream 10.0kb downstream 10000 false Chr2: 10866758-10876757 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378023 5261 Brassicaceae View MSA
123836601 5264 Brassicales-Malvales View MSA
124347081 5266 SBM View MSA
124245297 5268 Malvidae View MSA
124069406 5270 Rosid View MSA
123741910 5271 Pentapetalae View MSA
122794627 5272 Eudicot View MSA
122048281 5273 Angiosperm View MSA
121348170 5274 Embryophyte View MSA
123427307 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.122        
cufflinks 1.92        
cufflinks 0.93       Low
cufflinks 2.142        
cufflinks 1.276        
cufflinks 2.175        

0 Strain