Gene : AT2G25560 A. thaliana TAIR10
Defline:  (1 of 4) PTHR24078//PTHR24078:SF208 - DNAJ HOMOLOG SUBFAMILY C MEMBER // SUBFAMILY NOT NAMED Genomic Order:  1828
Name:  ? AT2G25560 Secondary Identifier:  ? PAC:19639280
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G25560 0.5kb upstream 0.5kb upstream 3698 true Chr2: 10880171-10883868 Arabidopsis thaliana
AT2G25560 0.5kb upstream 0.5kb upstream 500 false Chr2: 10880171-10880670 Arabidopsis thaliana
AT2G25560 0.5kb downstream 0.5kb downstream 3698 true Chr2: 10880671-10884368 Arabidopsis thaliana
AT2G25560 0.5kb downstream 0.5kb downstream 500 false Chr2: 10883869-10884368 Arabidopsis thaliana
AT2G25560 1.0kb upstream 1.0kb upstream 4198 true Chr2: 10879671-10883868 Arabidopsis thaliana
AT2G25560 1.0kb upstream 1.0kb upstream 1000 false Chr2: 10879671-10880670 Arabidopsis thaliana
AT2G25560 1.0kb downstream 1.0kb downstream 4198 true Chr2: 10880671-10884868 Arabidopsis thaliana
AT2G25560 1.0kb downstream 1.0kb downstream 1000 false Chr2: 10883869-10884868 Arabidopsis thaliana
AT2G25560 2.0kb upstream 2.0kb upstream 5198 true Chr2: 10878671-10883868 Arabidopsis thaliana
AT2G25560 2.0kb upstream 2.0kb upstream 2000 false Chr2: 10878671-10880670 Arabidopsis thaliana
AT2G25560 2.0kb downstream 2.0kb downstream 5198 true Chr2: 10880671-10885868 Arabidopsis thaliana
AT2G25560 2.0kb downstream 2.0kb downstream 2000 false Chr2: 10883869-10885868 Arabidopsis thaliana
AT2G25560 5.0kb upstream 5.0kb upstream 8198 true Chr2: 10875671-10883868 Arabidopsis thaliana
AT2G25560 5.0kb upstream 5.0kb upstream 5000 false Chr2: 10875671-10880670 Arabidopsis thaliana
AT2G25560 5.0kb downstream 5.0kb downstream 8198 true Chr2: 10880671-10888868 Arabidopsis thaliana
AT2G25560 5.0kb downstream 5.0kb downstream 5000 false Chr2: 10883869-10888868 Arabidopsis thaliana
AT2G25560 10.0kb upstream 10.0kb upstream 13198 true Chr2: 10870671-10883868 Arabidopsis thaliana
AT2G25560 10.0kb upstream 10.0kb upstream 10000 false Chr2: 10870671-10880670 Arabidopsis thaliana
AT2G25560 10.0kb downstream 10.0kb downstream 13198 true Chr2: 10880671-10893868 Arabidopsis thaliana
AT2G25560 10.0kb downstream 10.0kb downstream 10000 false Chr2: 10883869-10893868 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374274 5261 Brassicaceae View MSA
123837355 5264 Brassicales-Malvales View MSA
124342325 5266 SBM View MSA
124244918 5268 Malvidae View MSA
124073308 5270 Rosid View MSA
123746271 5271 Pentapetalae View MSA
122796455 5272 Eudicot View MSA
122048090 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121348216 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.496        
cufflinks 4.889        
cufflinks 2.849       Low
cufflinks 5.43       High
cufflinks 2.881       Low
cufflinks 5.135        

0 Strain