Gene : RR12 A. thaliana TAIR10
Primary Identifier:  ? AT2G25180 Defline:  (1 of 2) PTHR26402//PTHR26402:SF423 - RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM // TWO-COMPONENT RESPONSE REGULATOR ARR10-RELATED
Genomic Order:  1786 Name:  ? AT2G25180
Secondary Identifier:  ? PAC:19640315
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G25180 0.5kb upstream 0.5kb upstream 3161 true Chr2: 10724301-10727461 Arabidopsis thaliana
AT2G25180 0.5kb upstream 0.5kb upstream 500 false Chr2: 10726962-10727461 Arabidopsis thaliana
AT2G25180 0.5kb downstream 0.5kb downstream 3161 true Chr2: 10723801-10726961 Arabidopsis thaliana
AT2G25180 0.5kb downstream 0.5kb downstream 500 false Chr2: 10723801-10724300 Arabidopsis thaliana
AT2G25180 1.0kb upstream 1.0kb upstream 3661 true Chr2: 10724301-10727961 Arabidopsis thaliana
AT2G25180 1.0kb upstream 1.0kb upstream 1000 false Chr2: 10726962-10727961 Arabidopsis thaliana
AT2G25180 1.0kb downstream 1.0kb downstream 3661 true Chr2: 10723301-10726961 Arabidopsis thaliana
AT2G25180 1.0kb downstream 1.0kb downstream 1000 false Chr2: 10723301-10724300 Arabidopsis thaliana
AT2G25180 2.0kb upstream 2.0kb upstream 4661 true Chr2: 10724301-10728961 Arabidopsis thaliana
AT2G25180 2.0kb upstream 2.0kb upstream 2000 false Chr2: 10726962-10728961 Arabidopsis thaliana
AT2G25180 2.0kb downstream 2.0kb downstream 4661 true Chr2: 10722301-10726961 Arabidopsis thaliana
AT2G25180 2.0kb downstream 2.0kb downstream 2000 false Chr2: 10722301-10724300 Arabidopsis thaliana
AT2G25180 5.0kb upstream 5.0kb upstream 7661 true Chr2: 10724301-10731961 Arabidopsis thaliana
AT2G25180 5.0kb upstream 5.0kb upstream 5000 false Chr2: 10726962-10731961 Arabidopsis thaliana
AT2G25180 5.0kb downstream 5.0kb downstream 7661 true Chr2: 10719301-10726961 Arabidopsis thaliana
AT2G25180 5.0kb downstream 5.0kb downstream 5000 false Chr2: 10719301-10724300 Arabidopsis thaliana
AT2G25180 10.0kb upstream 10.0kb upstream 12661 true Chr2: 10724301-10736961 Arabidopsis thaliana
AT2G25180 10.0kb upstream 10.0kb upstream 10000 false Chr2: 10726962-10736961 Arabidopsis thaliana
AT2G25180 10.0kb downstream 10.0kb downstream 12661 true Chr2: 10714301-10726961 Arabidopsis thaliana
AT2G25180 10.0kb downstream 10.0kb downstream 10000 false Chr2: 10714301-10724300 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374480 5261 Brassicaceae View MSA
123831659 5264 Brassicales-Malvales View MSA
124338653 5266 SBM View MSA
124252981 5268 Malvidae View MSA
124066556 5270 Rosid View MSA
123743019 5271 Pentapetalae View MSA
122794992 5272 Eudicot View MSA
122046699 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121351259 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.914        
cufflinks 10.688        
cufflinks 5.047       Low
cufflinks 13.951       High
cufflinks 6.536        
cufflinks 10.813        

0 Strain