Gene : AT2G25280 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11060 - PROTEIN MEMO1 Genomic Order:  1797
Name:  ? AT2G25280 Secondary Identifier:  ? PAC:19643241
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G25280 0.5kb upstream 0.5kb upstream 2956 true Chr2: 10762355-10765310 Arabidopsis thaliana
AT2G25280 0.5kb upstream 0.5kb upstream 500 false Chr2: 10764811-10765310 Arabidopsis thaliana
AT2G25280 0.5kb downstream 0.5kb downstream 2956 true Chr2: 10761855-10764810 Arabidopsis thaliana
AT2G25280 0.5kb downstream 0.5kb downstream 500 false Chr2: 10761855-10762354 Arabidopsis thaliana
AT2G25280 1.0kb upstream 1.0kb upstream 3456 true Chr2: 10762355-10765810 Arabidopsis thaliana
AT2G25280 1.0kb upstream 1.0kb upstream 1000 false Chr2: 10764811-10765810 Arabidopsis thaliana
AT2G25280 1.0kb downstream 1.0kb downstream 3456 true Chr2: 10761355-10764810 Arabidopsis thaliana
AT2G25280 1.0kb downstream 1.0kb downstream 1000 false Chr2: 10761355-10762354 Arabidopsis thaliana
AT2G25280 2.0kb upstream 2.0kb upstream 4456 true Chr2: 10762355-10766810 Arabidopsis thaliana
AT2G25280 2.0kb upstream 2.0kb upstream 2000 false Chr2: 10764811-10766810 Arabidopsis thaliana
AT2G25280 2.0kb downstream 2.0kb downstream 4456 true Chr2: 10760355-10764810 Arabidopsis thaliana
AT2G25280 2.0kb downstream 2.0kb downstream 2000 false Chr2: 10760355-10762354 Arabidopsis thaliana
AT2G25280 5.0kb upstream 5.0kb upstream 7456 true Chr2: 10762355-10769810 Arabidopsis thaliana
AT2G25280 5.0kb upstream 5.0kb upstream 5000 false Chr2: 10764811-10769810 Arabidopsis thaliana
AT2G25280 5.0kb downstream 5.0kb downstream 7456 true Chr2: 10757355-10764810 Arabidopsis thaliana
AT2G25280 5.0kb downstream 5.0kb downstream 5000 false Chr2: 10757355-10762354 Arabidopsis thaliana
AT2G25280 10.0kb upstream 10.0kb upstream 12456 true Chr2: 10762355-10774810 Arabidopsis thaliana
AT2G25280 10.0kb upstream 10.0kb upstream 10000 false Chr2: 10764811-10774810 Arabidopsis thaliana
AT2G25280 10.0kb downstream 10.0kb downstream 12456 true Chr2: 10752355-10764810 Arabidopsis thaliana
AT2G25280 10.0kb downstream 10.0kb downstream 10000 false Chr2: 10752355-10762354 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381365 5261 Brassicaceae View MSA
123830854 5264 Brassicales-Malvales View MSA
124336684 5266 SBM View MSA
124239523 5268 Malvidae View MSA
124061340 5270 Rosid View MSA
123739302 5271 Pentapetalae View MSA
122792627 5272 Eudicot View MSA
122043958 5273 Angiosperm View MSA
121344189 5274 Embryophyte View MSA
123424633 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.455        
cufflinks 16.495        
cufflinks 11.709       Low
cufflinks 16.858       High
cufflinks 12.487        
cufflinks 16.122        

0 Strain