Gene : AT2G24990 A. thaliana TAIR10
Defline:  (1 of 2) K07178 - RIO kinase 1 (RIOK1) Genomic Order:  1768
Name:  ? AT2G24990 Secondary Identifier:  ? PAC:19642232
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G24990 0.5kb upstream 0.5kb upstream 3586 true Chr2: 10624714-10628299 Arabidopsis thaliana
AT2G24990 0.5kb upstream 0.5kb upstream 500 false Chr2: 10624714-10625213 Arabidopsis thaliana
AT2G24990 0.5kb downstream 0.5kb downstream 3586 true Chr2: 10625214-10628799 Arabidopsis thaliana
AT2G24990 0.5kb downstream 0.5kb downstream 500 false Chr2: 10628300-10628799 Arabidopsis thaliana
AT2G24990 1.0kb upstream 1.0kb upstream 4086 true Chr2: 10624214-10628299 Arabidopsis thaliana
AT2G24990 1.0kb upstream 1.0kb upstream 1000 false Chr2: 10624214-10625213 Arabidopsis thaliana
AT2G24990 1.0kb downstream 1.0kb downstream 4086 true Chr2: 10625214-10629299 Arabidopsis thaliana
AT2G24990 1.0kb downstream 1.0kb downstream 1000 false Chr2: 10628300-10629299 Arabidopsis thaliana
AT2G24990 2.0kb upstream 2.0kb upstream 5086 true Chr2: 10623214-10628299 Arabidopsis thaliana
AT2G24990 2.0kb upstream 2.0kb upstream 2000 false Chr2: 10623214-10625213 Arabidopsis thaliana
AT2G24990 2.0kb downstream 2.0kb downstream 5086 true Chr2: 10625214-10630299 Arabidopsis thaliana
AT2G24990 2.0kb downstream 2.0kb downstream 2000 false Chr2: 10628300-10630299 Arabidopsis thaliana
AT2G24990 5.0kb upstream 5.0kb upstream 8086 true Chr2: 10620214-10628299 Arabidopsis thaliana
AT2G24990 5.0kb upstream 5.0kb upstream 5000 false Chr2: 10620214-10625213 Arabidopsis thaliana
AT2G24990 5.0kb downstream 5.0kb downstream 8086 true Chr2: 10625214-10633299 Arabidopsis thaliana
AT2G24990 5.0kb downstream 5.0kb downstream 5000 false Chr2: 10628300-10633299 Arabidopsis thaliana
AT2G24990 10.0kb upstream 10.0kb upstream 13086 true Chr2: 10615214-10628299 Arabidopsis thaliana
AT2G24990 10.0kb upstream 10.0kb upstream 10000 false Chr2: 10615214-10625213 Arabidopsis thaliana
AT2G24990 10.0kb downstream 10.0kb downstream 13086 true Chr2: 10625214-10638299 Arabidopsis thaliana
AT2G24990 10.0kb downstream 10.0kb downstream 10000 false Chr2: 10628300-10638299 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122329518 5261 Brassicaceae Singleton cluster - no MSA
123836903 5264 Brassicales-Malvales View MSA
124322223 5266 SBM View MSA
124246706 5268 Malvidae View MSA
124062198 5270 Rosid View MSA
123740947 5271 Pentapetalae View MSA
122786592 5272 Eudicot View MSA
122044010 5273 Angiosperm View MSA
121344530 5274 Embryophyte View MSA
123428706 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.366        
cufflinks 7.647        
cufflinks 5.138        
cufflinks 8.712       High
cufflinks 4.467       Low
cufflinks 8.176        

0 Strain