Gene : AGL61 A. thaliana TAIR10
Primary Identifier:  ? AT2G24840 Defline:  (1 of 98) KOG0014 - MADS box transcription factor
Genomic Order:  1757 Name:  ? AT2G24840
Secondary Identifier:  ? PAC:19642372
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G24840 0.5kb upstream 0.5kb upstream 1434 true Chr2: 10580582-10582015 Arabidopsis thaliana
AT2G24840 0.5kb upstream 0.5kb upstream 500 false Chr2: 10580582-10581081 Arabidopsis thaliana
AT2G24840 0.5kb downstream 0.5kb downstream 1434 true Chr2: 10581082-10582515 Arabidopsis thaliana
AT2G24840 0.5kb downstream 0.5kb downstream 500 false Chr2: 10582016-10582515 Arabidopsis thaliana
AT2G24840 1.0kb upstream 1.0kb upstream 1934 true Chr2: 10580082-10582015 Arabidopsis thaliana
AT2G24840 1.0kb upstream 1.0kb upstream 1000 false Chr2: 10580082-10581081 Arabidopsis thaliana
AT2G24840 1.0kb downstream 1.0kb downstream 1934 true Chr2: 10581082-10583015 Arabidopsis thaliana
AT2G24840 1.0kb downstream 1.0kb downstream 1000 false Chr2: 10582016-10583015 Arabidopsis thaliana
AT2G24840 2.0kb upstream 2.0kb upstream 2934 true Chr2: 10579082-10582015 Arabidopsis thaliana
AT2G24840 2.0kb upstream 2.0kb upstream 2000 false Chr2: 10579082-10581081 Arabidopsis thaliana
AT2G24840 2.0kb downstream 2.0kb downstream 2934 true Chr2: 10581082-10584015 Arabidopsis thaliana
AT2G24840 2.0kb downstream 2.0kb downstream 2000 false Chr2: 10582016-10584015 Arabidopsis thaliana
AT2G24840 5.0kb upstream 5.0kb upstream 5934 true Chr2: 10576082-10582015 Arabidopsis thaliana
AT2G24840 5.0kb upstream 5.0kb upstream 5000 false Chr2: 10576082-10581081 Arabidopsis thaliana
AT2G24840 5.0kb downstream 5.0kb downstream 5934 true Chr2: 10581082-10587015 Arabidopsis thaliana
AT2G24840 5.0kb downstream 5.0kb downstream 5000 false Chr2: 10582016-10587015 Arabidopsis thaliana
AT2G24840 10.0kb upstream 10.0kb upstream 10934 true Chr2: 10571082-10582015 Arabidopsis thaliana
AT2G24840 10.0kb upstream 10.0kb upstream 10000 false Chr2: 10571082-10581081 Arabidopsis thaliana
AT2G24840 10.0kb downstream 10.0kb downstream 10934 true Chr2: 10581082-10592015 Arabidopsis thaliana
AT2G24840 10.0kb downstream 10.0kb downstream 10000 false Chr2: 10582016-10592015 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378664 5261 Brassicaceae View MSA
123840658 5264 Brassicales-Malvales View MSA
124347388 5266 SBM View MSA
124252188 5268 Malvidae View MSA
124069913 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.033     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low  

0 Strain