Gene : HA5 A. thaliana TAIR10
Primary Identifier:  ? AT2G24520 Defline:  (1 of 6) PTHR24093:SF355 - ATPASE 1, PLASMA MEMBRANE-TYPE-RELATED
Genomic Order:  1717 Name:  ? AT2G24520
Secondary Identifier:  ? PAC:19639827
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G24520 0.5kb upstream 0.5kb upstream 4852 true Chr2: 10414932-10419783 Arabidopsis thaliana
AT2G24520 0.5kb upstream 0.5kb upstream 500 false Chr2: 10414932-10415431 Arabidopsis thaliana
AT2G24520 0.5kb downstream 0.5kb downstream 4852 true Chr2: 10415432-10420283 Arabidopsis thaliana
AT2G24520 0.5kb downstream 0.5kb downstream 500 false Chr2: 10419784-10420283 Arabidopsis thaliana
AT2G24520 1.0kb upstream 1.0kb upstream 5352 true Chr2: 10414432-10419783 Arabidopsis thaliana
AT2G24520 1.0kb upstream 1.0kb upstream 1000 false Chr2: 10414432-10415431 Arabidopsis thaliana
AT2G24520 1.0kb downstream 1.0kb downstream 5352 true Chr2: 10415432-10420783 Arabidopsis thaliana
AT2G24520 1.0kb downstream 1.0kb downstream 1000 false Chr2: 10419784-10420783 Arabidopsis thaliana
AT2G24520 2.0kb upstream 2.0kb upstream 6352 true Chr2: 10413432-10419783 Arabidopsis thaliana
AT2G24520 2.0kb upstream 2.0kb upstream 2000 false Chr2: 10413432-10415431 Arabidopsis thaliana
AT2G24520 2.0kb downstream 2.0kb downstream 6352 true Chr2: 10415432-10421783 Arabidopsis thaliana
AT2G24520 2.0kb downstream 2.0kb downstream 2000 false Chr2: 10419784-10421783 Arabidopsis thaliana
AT2G24520 5.0kb upstream 5.0kb upstream 9352 true Chr2: 10410432-10419783 Arabidopsis thaliana
AT2G24520 5.0kb upstream 5.0kb upstream 5000 false Chr2: 10410432-10415431 Arabidopsis thaliana
AT2G24520 5.0kb downstream 5.0kb downstream 9352 true Chr2: 10415432-10424783 Arabidopsis thaliana
AT2G24520 5.0kb downstream 5.0kb downstream 5000 false Chr2: 10419784-10424783 Arabidopsis thaliana
AT2G24520 10.0kb upstream 10.0kb upstream 14352 true Chr2: 10405432-10419783 Arabidopsis thaliana
AT2G24520 10.0kb upstream 10.0kb upstream 10000 false Chr2: 10405432-10415431 Arabidopsis thaliana
AT2G24520 10.0kb downstream 10.0kb downstream 14352 true Chr2: 10415432-10429783 Arabidopsis thaliana
AT2G24520 10.0kb downstream 10.0kb downstream 10000 false Chr2: 10419784-10429783 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367107 5261 Brassicaceae View MSA
123837278 5264 Brassicales-Malvales View MSA
124346754 5266 SBM View MSA
124237078 5268 Malvidae View MSA
124073310 5270 Rosid View MSA
123751017 5271 Pentapetalae View MSA
122796712 5272 Eudicot View MSA
122050656 5273 Angiosperm View MSA
121349531 5274 Embryophyte View MSA
123428375 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.559       High
cufflinks 4.42        
cufflinks 4.479        
cufflinks 4.214        
cufflinks 4.363        
cufflinks 3.443       Low

0 Strain