Gene : AT2G24580 A. thaliana TAIR10
Defline:  (1 of 1) 1.5.3.1 - Sarcosine oxidase Genomic Order:  1723
Name:  ? AT2G24580 Secondary Identifier:  ? PAC:19643273
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G24580 0.5kb upstream 0.5kb upstream 1953 true Chr2: 10444790-10446742 Arabidopsis thaliana
AT2G24580 0.5kb upstream 0.5kb upstream 500 false Chr2: 10446243-10446742 Arabidopsis thaliana
AT2G24580 0.5kb downstream 0.5kb downstream 1953 true Chr2: 10444290-10446242 Arabidopsis thaliana
AT2G24580 0.5kb downstream 0.5kb downstream 500 false Chr2: 10444290-10444789 Arabidopsis thaliana
AT2G24580 1.0kb upstream 1.0kb upstream 2453 true Chr2: 10444790-10447242 Arabidopsis thaliana
AT2G24580 1.0kb upstream 1.0kb upstream 1000 false Chr2: 10446243-10447242 Arabidopsis thaliana
AT2G24580 1.0kb downstream 1.0kb downstream 2453 true Chr2: 10443790-10446242 Arabidopsis thaliana
AT2G24580 1.0kb downstream 1.0kb downstream 1000 false Chr2: 10443790-10444789 Arabidopsis thaliana
AT2G24580 2.0kb upstream 2.0kb upstream 3453 true Chr2: 10444790-10448242 Arabidopsis thaliana
AT2G24580 2.0kb upstream 2.0kb upstream 2000 false Chr2: 10446243-10448242 Arabidopsis thaliana
AT2G24580 2.0kb downstream 2.0kb downstream 3453 true Chr2: 10442790-10446242 Arabidopsis thaliana
AT2G24580 2.0kb downstream 2.0kb downstream 2000 false Chr2: 10442790-10444789 Arabidopsis thaliana
AT2G24580 5.0kb upstream 5.0kb upstream 6453 true Chr2: 10444790-10451242 Arabidopsis thaliana
AT2G24580 5.0kb upstream 5.0kb upstream 5000 false Chr2: 10446243-10451242 Arabidopsis thaliana
AT2G24580 5.0kb downstream 5.0kb downstream 6453 true Chr2: 10439790-10446242 Arabidopsis thaliana
AT2G24580 5.0kb downstream 5.0kb downstream 5000 false Chr2: 10439790-10444789 Arabidopsis thaliana
AT2G24580 10.0kb upstream 10.0kb upstream 11453 true Chr2: 10444790-10456242 Arabidopsis thaliana
AT2G24580 10.0kb upstream 10.0kb upstream 10000 false Chr2: 10446243-10456242 Arabidopsis thaliana
AT2G24580 10.0kb downstream 10.0kb downstream 11453 true Chr2: 10434790-10446242 Arabidopsis thaliana
AT2G24580 10.0kb downstream 10.0kb downstream 10000 false Chr2: 10434790-10444789 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370136 5261 Brassicaceae View MSA
123831366 5264 Brassicales-Malvales View MSA
124346551 5266 SBM View MSA
124237747 5268 Malvidae View MSA
124067197 5270 Rosid View MSA
123745961 5271 Pentapetalae View MSA
122793788 5272 Eudicot View MSA
122051106 5273 Angiosperm View MSA
121351535 5274 Embryophyte View MSA
123427900 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.17       Low
cufflinks 13.211       High
cufflinks 8.695        
cufflinks 14.04       High
cufflinks 7.082        
cufflinks 8.143        

0 Strain