Gene : BLH4 A. thaliana TAIR10

Primary Identifier:  ? AT2G23760 Defline:  (1 of 2) PTHR11850//PTHR11850:SF114 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // BEL1-LIKE HOMEODOMAIN PROTEIN 2-RELATED
Genomic Order:  1640 Name:  ? AT2G23760
Secondary Identifier:  ? PAC:19643433

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G23760 0.5kb upstream 0.5kb upstream 6005 true Chr2: 10107709-10113713 Arabidopsis thaliana
AT2G23760 0.5kb upstream 0.5kb upstream 500 false Chr2: 10113214-10113713 Arabidopsis thaliana
AT2G23760 0.5kb downstream 0.5kb downstream 6005 true Chr2: 10107209-10113213 Arabidopsis thaliana
AT2G23760 0.5kb downstream 0.5kb downstream 500 false Chr2: 10107209-10107708 Arabidopsis thaliana
AT2G23760 1.0kb upstream 1.0kb upstream 6505 true Chr2: 10107709-10114213 Arabidopsis thaliana
AT2G23760 1.0kb upstream 1.0kb upstream 1000 false Chr2: 10113214-10114213 Arabidopsis thaliana
AT2G23760 1.0kb downstream 1.0kb downstream 6505 true Chr2: 10106709-10113213 Arabidopsis thaliana
AT2G23760 1.0kb downstream 1.0kb downstream 1000 false Chr2: 10106709-10107708 Arabidopsis thaliana
AT2G23760 2.0kb upstream 2.0kb upstream 7505 true Chr2: 10107709-10115213 Arabidopsis thaliana
AT2G23760 2.0kb upstream 2.0kb upstream 2000 false Chr2: 10113214-10115213 Arabidopsis thaliana
AT2G23760 2.0kb downstream 2.0kb downstream 7505 true Chr2: 10105709-10113213 Arabidopsis thaliana
AT2G23760 2.0kb downstream 2.0kb downstream 2000 false Chr2: 10105709-10107708 Arabidopsis thaliana
AT2G23760 5.0kb upstream 5.0kb upstream 10505 true Chr2: 10107709-10118213 Arabidopsis thaliana
AT2G23760 5.0kb upstream 5.0kb upstream 5000 false Chr2: 10113214-10118213 Arabidopsis thaliana
AT2G23760 5.0kb downstream 5.0kb downstream 10505 true Chr2: 10102709-10113213 Arabidopsis thaliana
AT2G23760 5.0kb downstream 5.0kb downstream 5000 false Chr2: 10102709-10107708 Arabidopsis thaliana
AT2G23760 10.0kb upstream 10.0kb upstream 15505 true Chr2: 10107709-10123213 Arabidopsis thaliana
AT2G23760 10.0kb upstream 10.0kb upstream 10000 false Chr2: 10113214-10123213 Arabidopsis thaliana
AT2G23760 10.0kb downstream 10.0kb downstream 15505 true Chr2: 10097709-10113213 Arabidopsis thaliana
AT2G23760 10.0kb downstream 10.0kb downstream 10000 false Chr2: 10097709-10107708 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370468 5261 Brassicaceae View MSA
123840925 5264 Brassicales-Malvales View MSA
124338294 5266 SBM View MSA
124245086 5268 Malvidae View MSA
124067451 5270 Rosid View MSA
123743533 5271 Pentapetalae View MSA
122796182 5272 Eudicot View MSA
122049932 5273 Angiosperm View MSA
121350603 5274 Embryophyte View MSA
123426094 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.354        
cufflinks 0.495       Low
cufflinks 4.093        
cufflinks 0.639        
cufflinks 4.127        
cufflinks 0.593        

0 Strain