Gene : AT2G23890 A. thaliana TAIR10
Defline:  (1 of 6) 3.1.3.5 - 5'-nucleotidase Genomic Order:  1650
Name:  ? AT2G23890 Secondary Identifier:  ? PAC:19643214
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Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5381 Arabidopsis thaliana pathologic  
Athaliana PWY-5695 Arabidopsis thaliana pathologic  
Athaliana PWY-6596 Arabidopsis thaliana pathologic  
Athaliana PWY-6606 Arabidopsis thaliana pathologic  
Athaliana PWY-6608 Arabidopsis thaliana pathologic  
Athaliana PWY-7185 Arabidopsis thaliana pathologic  
Athaliana SALVADEHYPOX-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G23890 0.5kb upstream 0.5kb upstream 3827 true Chr2: 10170101-10173927 Arabidopsis thaliana
AT2G23890 0.5kb upstream 0.5kb upstream 500 false Chr2: 10170101-10170600 Arabidopsis thaliana
AT2G23890 0.5kb downstream 0.5kb downstream 3827 true Chr2: 10170601-10174427 Arabidopsis thaliana
AT2G23890 0.5kb downstream 0.5kb downstream 500 false Chr2: 10173928-10174427 Arabidopsis thaliana
AT2G23890 1.0kb upstream 1.0kb upstream 4327 true Chr2: 10169601-10173927 Arabidopsis thaliana
AT2G23890 1.0kb upstream 1.0kb upstream 1000 false Chr2: 10169601-10170600 Arabidopsis thaliana
AT2G23890 1.0kb downstream 1.0kb downstream 4327 true Chr2: 10170601-10174927 Arabidopsis thaliana
AT2G23890 1.0kb downstream 1.0kb downstream 1000 false Chr2: 10173928-10174927 Arabidopsis thaliana
AT2G23890 2.0kb upstream 2.0kb upstream 5327 true Chr2: 10168601-10173927 Arabidopsis thaliana
AT2G23890 2.0kb upstream 2.0kb upstream 2000 false Chr2: 10168601-10170600 Arabidopsis thaliana
AT2G23890 2.0kb downstream 2.0kb downstream 5327 true Chr2: 10170601-10175927 Arabidopsis thaliana
AT2G23890 2.0kb downstream 2.0kb downstream 2000 false Chr2: 10173928-10175927 Arabidopsis thaliana
AT2G23890 5.0kb upstream 5.0kb upstream 8327 true Chr2: 10165601-10173927 Arabidopsis thaliana
AT2G23890 5.0kb upstream 5.0kb upstream 5000 false Chr2: 10165601-10170600 Arabidopsis thaliana
AT2G23890 5.0kb downstream 5.0kb downstream 8327 true Chr2: 10170601-10178927 Arabidopsis thaliana
AT2G23890 5.0kb downstream 5.0kb downstream 5000 false Chr2: 10173928-10178927 Arabidopsis thaliana
AT2G23890 10.0kb upstream 10.0kb upstream 13327 true Chr2: 10160601-10173927 Arabidopsis thaliana
AT2G23890 10.0kb upstream 10.0kb upstream 10000 false Chr2: 10160601-10170600 Arabidopsis thaliana
AT2G23890 10.0kb downstream 10.0kb downstream 13327 true Chr2: 10170601-10183927 Arabidopsis thaliana
AT2G23890 10.0kb downstream 10.0kb downstream 10000 false Chr2: 10173928-10183927 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369705 5261 Brassicaceae View MSA
123828548 5264 Brassicales-Malvales View MSA
124338760 5266 SBM View MSA
124239733 5268 Malvidae View MSA
124062201 5270 Rosid View MSA
123740531 5271 Pentapetalae View MSA
122793473 5272 Eudicot View MSA
122047962 5273 Angiosperm View MSA
121348672 5274 Embryophyte View MSA
123428872 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.602        
cufflinks 7.36        
cufflinks 5.619       Low
cufflinks 7.924       High
cufflinks 6.582        
cufflinks 6.919        

0 Strain