Gene : AT2G23960 A. thaliana TAIR10
Defline:  (1 of 5) PTHR11922:SF42 - CLASS I GLUTAMINE AMIDOTRANSFERASE DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  1658
Name:  ? AT2G23960 Secondary Identifier:  ? PAC:19639073
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G23960 0.5kb upstream 0.5kb upstream 2052 true Chr2: 10195559-10197610 Arabidopsis thaliana
AT2G23960 0.5kb upstream 0.5kb upstream 500 false Chr2: 10195559-10196058 Arabidopsis thaliana
AT2G23960 0.5kb downstream 0.5kb downstream 2052 true Chr2: 10196059-10198110 Arabidopsis thaliana
AT2G23960 0.5kb downstream 0.5kb downstream 500 false Chr2: 10197611-10198110 Arabidopsis thaliana
AT2G23960 1.0kb upstream 1.0kb upstream 2552 true Chr2: 10195059-10197610 Arabidopsis thaliana
AT2G23960 1.0kb upstream 1.0kb upstream 1000 false Chr2: 10195059-10196058 Arabidopsis thaliana
AT2G23960 1.0kb downstream 1.0kb downstream 2552 true Chr2: 10196059-10198610 Arabidopsis thaliana
AT2G23960 1.0kb downstream 1.0kb downstream 1000 false Chr2: 10197611-10198610 Arabidopsis thaliana
AT2G23960 2.0kb upstream 2.0kb upstream 3552 true Chr2: 10194059-10197610 Arabidopsis thaliana
AT2G23960 2.0kb upstream 2.0kb upstream 2000 false Chr2: 10194059-10196058 Arabidopsis thaliana
AT2G23960 2.0kb downstream 2.0kb downstream 3552 true Chr2: 10196059-10199610 Arabidopsis thaliana
AT2G23960 2.0kb downstream 2.0kb downstream 2000 false Chr2: 10197611-10199610 Arabidopsis thaliana
AT2G23960 5.0kb upstream 5.0kb upstream 6552 true Chr2: 10191059-10197610 Arabidopsis thaliana
AT2G23960 5.0kb upstream 5.0kb upstream 5000 false Chr2: 10191059-10196058 Arabidopsis thaliana
AT2G23960 5.0kb downstream 5.0kb downstream 6552 true Chr2: 10196059-10202610 Arabidopsis thaliana
AT2G23960 5.0kb downstream 5.0kb downstream 5000 false Chr2: 10197611-10202610 Arabidopsis thaliana
AT2G23960 10.0kb upstream 10.0kb upstream 11552 true Chr2: 10186059-10197610 Arabidopsis thaliana
AT2G23960 10.0kb upstream 10.0kb upstream 10000 false Chr2: 10186059-10196058 Arabidopsis thaliana
AT2G23960 10.0kb downstream 10.0kb downstream 11552 true Chr2: 10196059-10207610 Arabidopsis thaliana
AT2G23960 10.0kb downstream 10.0kb downstream 10000 false Chr2: 10197611-10207610 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378320 5261 Brassicaceae View MSA
123801823 5264 Brassicales-Malvales View MSA
124299081 5266 SBM View MSA
124150583 5268 Malvidae View MSA
123876172 5270 Rosid View MSA
123459883 5271 Pentapetalae View MSA
122495265 5272 Eudicot View MSA
122050443 5273 Angiosperm View MSA
121350847 5274 Embryophyte View MSA
123426192 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.117     Low  
cufflinks 0.478        
cufflinks 0.035     Low Low
cufflinks 0.517        
cufflinks 0.038     Low Low
cufflinks 0.734       High

0 Strain