Gene : AT2G23360 A. thaliana TAIR10
Defline:  (1 of 8) KOG1003 - Actin filament-coating protein tropomyosin Genomic Order:  1607
Name:  ? AT2G23360 Secondary Identifier:  ? PAC:19638374
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G23360 0.5kb upstream 0.5kb upstream 4443 true Chr2: 9948403-9952845 Arabidopsis thaliana
AT2G23360 0.5kb upstream 0.5kb upstream 500 false Chr2: 9948403-9948902 Arabidopsis thaliana
AT2G23360 0.5kb downstream 0.5kb downstream 4443 true Chr2: 9948903-9953345 Arabidopsis thaliana
AT2G23360 0.5kb downstream 0.5kb downstream 500 false Chr2: 9952846-9953345 Arabidopsis thaliana
AT2G23360 1.0kb upstream 1.0kb upstream 4943 true Chr2: 9947903-9952845 Arabidopsis thaliana
AT2G23360 1.0kb upstream 1.0kb upstream 1000 false Chr2: 9947903-9948902 Arabidopsis thaliana
AT2G23360 1.0kb downstream 1.0kb downstream 4943 true Chr2: 9948903-9953845 Arabidopsis thaliana
AT2G23360 1.0kb downstream 1.0kb downstream 1000 false Chr2: 9952846-9953845 Arabidopsis thaliana
AT2G23360 2.0kb upstream 2.0kb upstream 5943 true Chr2: 9946903-9952845 Arabidopsis thaliana
AT2G23360 2.0kb upstream 2.0kb upstream 2000 false Chr2: 9946903-9948902 Arabidopsis thaliana
AT2G23360 2.0kb downstream 2.0kb downstream 5943 true Chr2: 9948903-9954845 Arabidopsis thaliana
AT2G23360 2.0kb downstream 2.0kb downstream 2000 false Chr2: 9952846-9954845 Arabidopsis thaliana
AT2G23360 5.0kb upstream 5.0kb upstream 8943 true Chr2: 9943903-9952845 Arabidopsis thaliana
AT2G23360 5.0kb upstream 5.0kb upstream 5000 false Chr2: 9943903-9948902 Arabidopsis thaliana
AT2G23360 5.0kb downstream 5.0kb downstream 8943 true Chr2: 9948903-9957845 Arabidopsis thaliana
AT2G23360 5.0kb downstream 5.0kb downstream 5000 false Chr2: 9952846-9957845 Arabidopsis thaliana
AT2G23360 10.0kb upstream 10.0kb upstream 13943 true Chr2: 9938903-9952845 Arabidopsis thaliana
AT2G23360 10.0kb upstream 10.0kb upstream 10000 false Chr2: 9938903-9948902 Arabidopsis thaliana
AT2G23360 10.0kb downstream 10.0kb downstream 13943 true Chr2: 9948903-9962845 Arabidopsis thaliana
AT2G23360 10.0kb downstream 10.0kb downstream 10000 false Chr2: 9952846-9962845 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360403 5261 Brassicaceae View MSA
123838129 5264 Brassicales-Malvales View MSA
124337223 5266 SBM View MSA
124243974 5268 Malvidae View MSA
124061123 5270 Rosid View MSA
123744650 5271 Pentapetalae View MSA
122797725 5272 Eudicot View MSA
122048583 5273 Angiosperm View MSA
121351576 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.017        
cufflinks 3.637        
cufflinks 3.006        
cufflinks 5.137       High
cufflinks 2.879       Low
cufflinks 3.485        

0 Strain