Gene : BRK1 A. thaliana TAIR10
Primary Identifier:  ? AT2G22640 Defline:  (1 of 1) K05752 - chromosome 3 open reading frame 10 (C3ORF10, HSPC300)
Genomic Order:  1523 Name:  ? AT2G22640
Secondary Identifier:  ? PAC:19641805
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G22640 0.5kb upstream 0.5kb upstream 1651 true Chr2: 9622568-9624218 Arabidopsis thaliana
AT2G22640 0.5kb upstream 0.5kb upstream 500 false Chr2: 9622568-9623067 Arabidopsis thaliana
AT2G22640 0.5kb downstream 0.5kb downstream 1651 true Chr2: 9623068-9624718 Arabidopsis thaliana
AT2G22640 0.5kb downstream 0.5kb downstream 500 false Chr2: 9624219-9624718 Arabidopsis thaliana
AT2G22640 1.0kb upstream 1.0kb upstream 2151 true Chr2: 9622068-9624218 Arabidopsis thaliana
AT2G22640 1.0kb upstream 1.0kb upstream 1000 false Chr2: 9622068-9623067 Arabidopsis thaliana
AT2G22640 1.0kb downstream 1.0kb downstream 2151 true Chr2: 9623068-9625218 Arabidopsis thaliana
AT2G22640 1.0kb downstream 1.0kb downstream 1000 false Chr2: 9624219-9625218 Arabidopsis thaliana
AT2G22640 2.0kb upstream 2.0kb upstream 3151 true Chr2: 9621068-9624218 Arabidopsis thaliana
AT2G22640 2.0kb upstream 2.0kb upstream 2000 false Chr2: 9621068-9623067 Arabidopsis thaliana
AT2G22640 2.0kb downstream 2.0kb downstream 3151 true Chr2: 9623068-9626218 Arabidopsis thaliana
AT2G22640 2.0kb downstream 2.0kb downstream 2000 false Chr2: 9624219-9626218 Arabidopsis thaliana
AT2G22640 5.0kb upstream 5.0kb upstream 6151 true Chr2: 9618068-9624218 Arabidopsis thaliana
AT2G22640 5.0kb upstream 5.0kb upstream 5000 false Chr2: 9618068-9623067 Arabidopsis thaliana
AT2G22640 5.0kb downstream 5.0kb downstream 6151 true Chr2: 9623068-9629218 Arabidopsis thaliana
AT2G22640 5.0kb downstream 5.0kb downstream 5000 false Chr2: 9624219-9629218 Arabidopsis thaliana
AT2G22640 10.0kb upstream 10.0kb upstream 11151 true Chr2: 9613068-9624218 Arabidopsis thaliana
AT2G22640 10.0kb upstream 10.0kb upstream 10000 false Chr2: 9613068-9623067 Arabidopsis thaliana
AT2G22640 10.0kb downstream 10.0kb downstream 11151 true Chr2: 9623068-9634218 Arabidopsis thaliana
AT2G22640 10.0kb downstream 10.0kb downstream 10000 false Chr2: 9624219-9634218 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372958 5261 Brassicaceae View MSA
123839904 5264 Brassicales-Malvales View MSA
124341122 5266 SBM View MSA
124247495 5268 Malvidae View MSA
124051100 5270 Rosid View MSA
123747984 5271 Pentapetalae View MSA
122786023 5272 Eudicot View MSA
122047228 5273 Angiosperm View MSA
121347694 5274 Embryophyte View MSA
123380603 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.757        
cufflinks 10.413        
cufflinks 10.685        
cufflinks 10.25        
cufflinks 8.73       Low
cufflinks 12.815       High

0 Strain