Gene : AT2G32340 A. thaliana TAIR10
Defline:  (1 of 2) PTHR21530//PTHR21530:SF0 - PHEROMONE SHUTDOWN PROTEIN // TRAB DOMAIN-CONTAINING PROTEIN Genomic Order:  2548
Name:  ? AT2G32340 Secondary Identifier:  ? PAC:19641621
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G32340 0.5kb upstream 0.5kb upstream 2788 true Chr2: 13731747-13734534 Arabidopsis thaliana
AT2G32340 0.5kb upstream 0.5kb upstream 500 false Chr2: 13731747-13732246 Arabidopsis thaliana
AT2G32340 0.5kb downstream 0.5kb downstream 2788 true Chr2: 13732247-13735034 Arabidopsis thaliana
AT2G32340 0.5kb downstream 0.5kb downstream 500 false Chr2: 13734535-13735034 Arabidopsis thaliana
AT2G32340 1.0kb upstream 1.0kb upstream 3288 true Chr2: 13731247-13734534 Arabidopsis thaliana
AT2G32340 1.0kb upstream 1.0kb upstream 1000 false Chr2: 13731247-13732246 Arabidopsis thaliana
AT2G32340 1.0kb downstream 1.0kb downstream 3288 true Chr2: 13732247-13735534 Arabidopsis thaliana
AT2G32340 1.0kb downstream 1.0kb downstream 1000 false Chr2: 13734535-13735534 Arabidopsis thaliana
AT2G32340 2.0kb upstream 2.0kb upstream 4288 true Chr2: 13730247-13734534 Arabidopsis thaliana
AT2G32340 2.0kb upstream 2.0kb upstream 2000 false Chr2: 13730247-13732246 Arabidopsis thaliana
AT2G32340 2.0kb downstream 2.0kb downstream 4288 true Chr2: 13732247-13736534 Arabidopsis thaliana
AT2G32340 2.0kb downstream 2.0kb downstream 2000 false Chr2: 13734535-13736534 Arabidopsis thaliana
AT2G32340 5.0kb upstream 5.0kb upstream 7288 true Chr2: 13727247-13734534 Arabidopsis thaliana
AT2G32340 5.0kb upstream 5.0kb upstream 5000 false Chr2: 13727247-13732246 Arabidopsis thaliana
AT2G32340 5.0kb downstream 5.0kb downstream 7288 true Chr2: 13732247-13739534 Arabidopsis thaliana
AT2G32340 5.0kb downstream 5.0kb downstream 5000 false Chr2: 13734535-13739534 Arabidopsis thaliana
AT2G32340 10.0kb upstream 10.0kb upstream 12288 true Chr2: 13722247-13734534 Arabidopsis thaliana
AT2G32340 10.0kb upstream 10.0kb upstream 10000 false Chr2: 13722247-13732246 Arabidopsis thaliana
AT2G32340 10.0kb downstream 10.0kb downstream 12288 true Chr2: 13732247-13744534 Arabidopsis thaliana
AT2G32340 10.0kb downstream 10.0kb downstream 10000 false Chr2: 13734535-13744534 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511861 5273 Angiosperm View MSA
122379267 5261 Brassicaceae View MSA
123802178 5264 Brassicales-Malvales View MSA
124299392 5266 SBM View MSA
124150817 5268 Malvidae View MSA
123876367 5270 Rosid View MSA
123460050 5271 Pentapetalae View MSA
122495430 5272 Eudicot View MSA
120784889 5274 Embryophyte View MSA
123427103 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.468       Low
cufflinks 2.818       High
cufflinks 2.457        
cufflinks 2.466        
cufflinks 1.885        
cufflinks 2.133        

0 Strain