Gene : ORP1A A. thaliana TAIR10
Primary Identifier:  ? AT2G31020 Defline:  (1 of 3) PTHR10972//PTHR10972:SF67 - OXYSTEROL-BINDING PROTEIN-RELATED // OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 1D
Genomic Order:  2400 Name:  ? AT2G31020
Secondary Identifier:  ? PAC:19639026
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G31020 0.5kb upstream 0.5kb upstream 3654 true Chr2: 13201168-13204821 Arabidopsis thaliana
AT2G31020 0.5kb upstream 0.5kb upstream 500 false Chr2: 13201168-13201667 Arabidopsis thaliana
AT2G31020 0.5kb downstream 0.5kb downstream 3654 true Chr2: 13201668-13205321 Arabidopsis thaliana
AT2G31020 0.5kb downstream 0.5kb downstream 500 false Chr2: 13204822-13205321 Arabidopsis thaliana
AT2G31020 1.0kb upstream 1.0kb upstream 4154 true Chr2: 13200668-13204821 Arabidopsis thaliana
AT2G31020 1.0kb upstream 1.0kb upstream 1000 false Chr2: 13200668-13201667 Arabidopsis thaliana
AT2G31020 1.0kb downstream 1.0kb downstream 4154 true Chr2: 13201668-13205821 Arabidopsis thaliana
AT2G31020 1.0kb downstream 1.0kb downstream 1000 false Chr2: 13204822-13205821 Arabidopsis thaliana
AT2G31020 2.0kb upstream 2.0kb upstream 5154 true Chr2: 13199668-13204821 Arabidopsis thaliana
AT2G31020 2.0kb upstream 2.0kb upstream 2000 false Chr2: 13199668-13201667 Arabidopsis thaliana
AT2G31020 2.0kb downstream 2.0kb downstream 5154 true Chr2: 13201668-13206821 Arabidopsis thaliana
AT2G31020 2.0kb downstream 2.0kb downstream 2000 false Chr2: 13204822-13206821 Arabidopsis thaliana
AT2G31020 5.0kb upstream 5.0kb upstream 8154 true Chr2: 13196668-13204821 Arabidopsis thaliana
AT2G31020 5.0kb upstream 5.0kb upstream 5000 false Chr2: 13196668-13201667 Arabidopsis thaliana
AT2G31020 5.0kb downstream 5.0kb downstream 8154 true Chr2: 13201668-13209821 Arabidopsis thaliana
AT2G31020 5.0kb downstream 5.0kb downstream 5000 false Chr2: 13204822-13209821 Arabidopsis thaliana
AT2G31020 10.0kb upstream 10.0kb upstream 13154 true Chr2: 13191668-13204821 Arabidopsis thaliana
AT2G31020 10.0kb upstream 10.0kb upstream 10000 false Chr2: 13191668-13201667 Arabidopsis thaliana
AT2G31020 10.0kb downstream 10.0kb downstream 13154 true Chr2: 13201668-13214821 Arabidopsis thaliana
AT2G31020 10.0kb downstream 10.0kb downstream 10000 false Chr2: 13204822-13214821 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041393 5273 Angiosperm View MSA
122343172 5261 Brassicaceae View MSA
123783455 5264 Brassicales-Malvales View MSA
124281688 5266 SBM View MSA
124136404 5268 Malvidae View MSA
123864271 5270 Rosid View MSA
123750665 5271 Pentapetalae View MSA
122795598 5272 Eudicot View MSA
121348669 5274 Embryophyte View MSA
123428535 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.403        
cufflinks 15.58        
cufflinks 0.587       Low
cufflinks 13.156        
cufflinks 0.856       Low
cufflinks 19.28        

0 Strain