Gene : AT2G30990 A. thaliana TAIR10
Defline:  (1 of 14) PF05097 - Protein of unknown function (DUF688) (DUF688) Genomic Order:  2396
Name:  ? AT2G30990 Secondary Identifier:  ? PAC:19642024
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G30990 0.5kb upstream 0.5kb upstream 3337 true Chr2: 13187583-13190919 Arabidopsis thaliana
AT2G30990 0.5kb upstream 0.5kb upstream 500 false Chr2: 13190420-13190919 Arabidopsis thaliana
AT2G30990 0.5kb downstream 0.5kb downstream 3337 true Chr2: 13187083-13190419 Arabidopsis thaliana
AT2G30990 0.5kb downstream 0.5kb downstream 500 false Chr2: 13187083-13187582 Arabidopsis thaliana
AT2G30990 1.0kb upstream 1.0kb upstream 3837 true Chr2: 13187583-13191419 Arabidopsis thaliana
AT2G30990 1.0kb upstream 1.0kb upstream 1000 false Chr2: 13190420-13191419 Arabidopsis thaliana
AT2G30990 1.0kb downstream 1.0kb downstream 3837 true Chr2: 13186583-13190419 Arabidopsis thaliana
AT2G30990 1.0kb downstream 1.0kb downstream 1000 false Chr2: 13186583-13187582 Arabidopsis thaliana
AT2G30990 2.0kb upstream 2.0kb upstream 4837 true Chr2: 13187583-13192419 Arabidopsis thaliana
AT2G30990 2.0kb upstream 2.0kb upstream 2000 false Chr2: 13190420-13192419 Arabidopsis thaliana
AT2G30990 2.0kb downstream 2.0kb downstream 4837 true Chr2: 13185583-13190419 Arabidopsis thaliana
AT2G30990 2.0kb downstream 2.0kb downstream 2000 false Chr2: 13185583-13187582 Arabidopsis thaliana
AT2G30990 5.0kb upstream 5.0kb upstream 7837 true Chr2: 13187583-13195419 Arabidopsis thaliana
AT2G30990 5.0kb upstream 5.0kb upstream 5000 false Chr2: 13190420-13195419 Arabidopsis thaliana
AT2G30990 5.0kb downstream 5.0kb downstream 7837 true Chr2: 13182583-13190419 Arabidopsis thaliana
AT2G30990 5.0kb downstream 5.0kb downstream 5000 false Chr2: 13182583-13187582 Arabidopsis thaliana
AT2G30990 10.0kb upstream 10.0kb upstream 12837 true Chr2: 13187583-13200419 Arabidopsis thaliana
AT2G30990 10.0kb upstream 10.0kb upstream 10000 false Chr2: 13190420-13200419 Arabidopsis thaliana
AT2G30990 10.0kb downstream 10.0kb downstream 12837 true Chr2: 13177583-13190419 Arabidopsis thaliana
AT2G30990 10.0kb downstream 10.0kb downstream 10000 false Chr2: 13177583-13187582 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364239 5261 Brassicaceae View MSA
123836988 5264 Brassicales-Malvales View MSA
124341544 5266 SBM View MSA
124243813 5268 Malvidae View MSA
124064039 5270 Rosid View MSA
123745252 5271 Pentapetalae View MSA
122793682 5272 Eudicot View MSA
122048199 5273 Angiosperm View MSA
121349828 5274 Embryophyte View MSA
123381462 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.754        
cufflinks 19.646       High
cufflinks 6.712       Low
cufflinks 11.354        
cufflinks 7.323        
cufflinks 14.038        

0 Strain