Gene : ASL5 A. thaliana TAIR10
Primary Identifier:  ? AT2G30130 Defline:  (1 of 1) PTHR31301:SF4 - LOB DOMAIN-CONTAINING PROTEIN 12
Genomic Order:  2305 Name:  ? AT2G30130
Secondary Identifier:  ? PAC:19638547
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G30130 0.5kb upstream 0.5kb upstream 1595 true Chr2: 12868130-12869724 Arabidopsis thaliana
AT2G30130 0.5kb upstream 0.5kb upstream 500 false Chr2: 12868130-12868629 Arabidopsis thaliana
AT2G30130 0.5kb downstream 0.5kb downstream 1595 true Chr2: 12868630-12870224 Arabidopsis thaliana
AT2G30130 0.5kb downstream 0.5kb downstream 500 false Chr2: 12869725-12870224 Arabidopsis thaliana
AT2G30130 1.0kb upstream 1.0kb upstream 2095 true Chr2: 12867630-12869724 Arabidopsis thaliana
AT2G30130 1.0kb upstream 1.0kb upstream 1000 false Chr2: 12867630-12868629 Arabidopsis thaliana
AT2G30130 1.0kb downstream 1.0kb downstream 2095 true Chr2: 12868630-12870724 Arabidopsis thaliana
AT2G30130 1.0kb downstream 1.0kb downstream 1000 false Chr2: 12869725-12870724 Arabidopsis thaliana
AT2G30130 2.0kb upstream 2.0kb upstream 3095 true Chr2: 12866630-12869724 Arabidopsis thaliana
AT2G30130 2.0kb upstream 2.0kb upstream 2000 false Chr2: 12866630-12868629 Arabidopsis thaliana
AT2G30130 2.0kb downstream 2.0kb downstream 3095 true Chr2: 12868630-12871724 Arabidopsis thaliana
AT2G30130 2.0kb downstream 2.0kb downstream 2000 false Chr2: 12869725-12871724 Arabidopsis thaliana
AT2G30130 5.0kb upstream 5.0kb upstream 6095 true Chr2: 12863630-12869724 Arabidopsis thaliana
AT2G30130 5.0kb upstream 5.0kb upstream 5000 false Chr2: 12863630-12868629 Arabidopsis thaliana
AT2G30130 5.0kb downstream 5.0kb downstream 6095 true Chr2: 12868630-12874724 Arabidopsis thaliana
AT2G30130 5.0kb downstream 5.0kb downstream 5000 false Chr2: 12869725-12874724 Arabidopsis thaliana
AT2G30130 10.0kb upstream 10.0kb upstream 11095 true Chr2: 12858630-12869724 Arabidopsis thaliana
AT2G30130 10.0kb upstream 10.0kb upstream 10000 false Chr2: 12858630-12868629 Arabidopsis thaliana
AT2G30130 10.0kb downstream 10.0kb downstream 11095 true Chr2: 12868630-12879724 Arabidopsis thaliana
AT2G30130 10.0kb downstream 10.0kb downstream 10000 false Chr2: 12869725-12879724 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379155 5261 Brassicaceae View MSA
123841354 5264 Brassicales-Malvales View MSA
124348573 5266 SBM View MSA
124246036 5268 Malvidae View MSA
124071000 5270 Rosid View MSA
123752210 5271 Pentapetalae View MSA
122796223 5272 Eudicot View MSA
122048133 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.866       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.972        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.741        

0 Strain