Gene : FAD3 A. thaliana TAIR10
Primary Identifier:  ? AT2G29980 Defline:  (1 of 3) K10257 - omega-3 fatty acid desaturase (delta-15 desaturase) (FAD8, desB)
Genomic Order:  2288 Name:  ? AT2G29980
Secondary Identifier:  ? PAC:19640298
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G29980 0.5kb upstream 0.5kb upstream 3963 true Chr2: 12781591-12785553 Arabidopsis thaliana
AT2G29980 0.5kb upstream 0.5kb upstream 500 false Chr2: 12785054-12785553 Arabidopsis thaliana
AT2G29980 0.5kb downstream 0.5kb downstream 3963 true Chr2: 12781091-12785053 Arabidopsis thaliana
AT2G29980 0.5kb downstream 0.5kb downstream 500 false Chr2: 12781091-12781590 Arabidopsis thaliana
AT2G29980 1.0kb upstream 1.0kb upstream 4463 true Chr2: 12781591-12786053 Arabidopsis thaliana
AT2G29980 1.0kb upstream 1.0kb upstream 1000 false Chr2: 12785054-12786053 Arabidopsis thaliana
AT2G29980 1.0kb downstream 1.0kb downstream 4463 true Chr2: 12780591-12785053 Arabidopsis thaliana
AT2G29980 1.0kb downstream 1.0kb downstream 1000 false Chr2: 12780591-12781590 Arabidopsis thaliana
AT2G29980 2.0kb upstream 2.0kb upstream 5463 true Chr2: 12781591-12787053 Arabidopsis thaliana
AT2G29980 2.0kb upstream 2.0kb upstream 2000 false Chr2: 12785054-12787053 Arabidopsis thaliana
AT2G29980 2.0kb downstream 2.0kb downstream 5463 true Chr2: 12779591-12785053 Arabidopsis thaliana
AT2G29980 2.0kb downstream 2.0kb downstream 2000 false Chr2: 12779591-12781590 Arabidopsis thaliana
AT2G29980 5.0kb upstream 5.0kb upstream 8463 true Chr2: 12781591-12790053 Arabidopsis thaliana
AT2G29980 5.0kb upstream 5.0kb upstream 5000 false Chr2: 12785054-12790053 Arabidopsis thaliana
AT2G29980 5.0kb downstream 5.0kb downstream 8463 true Chr2: 12776591-12785053 Arabidopsis thaliana
AT2G29980 5.0kb downstream 5.0kb downstream 5000 false Chr2: 12776591-12781590 Arabidopsis thaliana
AT2G29980 10.0kb upstream 10.0kb upstream 13463 true Chr2: 12781591-12795053 Arabidopsis thaliana
AT2G29980 10.0kb upstream 10.0kb upstream 10000 false Chr2: 12785054-12795053 Arabidopsis thaliana
AT2G29980 10.0kb downstream 10.0kb downstream 13463 true Chr2: 12771591-12785053 Arabidopsis thaliana
AT2G29980 10.0kb downstream 10.0kb downstream 10000 false Chr2: 12771591-12781590 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375197 5261 Brassicaceae View MSA
123840085 5264 Brassicales-Malvales View MSA
124322677 5266 SBM View MSA
124240944 5268 Malvidae View MSA
124072004 5270 Rosid View MSA
123752062 5271 Pentapetalae View MSA
122788316 5272 Eudicot View MSA
122045494 5273 Angiosperm View MSA
121344489 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.363        
cufflinks 23.31        
cufflinks 23.256        
cufflinks 17.672       Low
cufflinks 18.337       Low
cufflinks 22.73        

0 Strain