Gene : RPC14 A. thaliana TAIR10
Primary Identifier:  ? AT2G29540 Defline:  (1 of 1) K03020 - DNA-directed RNA polymerases I and III subunit RPAC2 (RPC19, POLR1D)
Genomic Order:  2241 Name:  ? AT2G29540
Secondary Identifier:  ? PAC:19642566
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0 Pathways

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G29540 0.5kb upstream 0.5kb upstream 1924 true Chr2: 12642021-12643944 Arabidopsis thaliana
AT2G29540 0.5kb upstream 0.5kb upstream 500 false Chr2: 12642021-12642520 Arabidopsis thaliana
AT2G29540 0.5kb downstream 0.5kb downstream 1924 true Chr2: 12642521-12644444 Arabidopsis thaliana
AT2G29540 0.5kb downstream 0.5kb downstream 500 false Chr2: 12643945-12644444 Arabidopsis thaliana
AT2G29540 1.0kb upstream 1.0kb upstream 2424 true Chr2: 12641521-12643944 Arabidopsis thaliana
AT2G29540 1.0kb upstream 1.0kb upstream 1000 false Chr2: 12641521-12642520 Arabidopsis thaliana
AT2G29540 1.0kb downstream 1.0kb downstream 2424 true Chr2: 12642521-12644944 Arabidopsis thaliana
AT2G29540 1.0kb downstream 1.0kb downstream 1000 false Chr2: 12643945-12644944 Arabidopsis thaliana
AT2G29540 2.0kb upstream 2.0kb upstream 3424 true Chr2: 12640521-12643944 Arabidopsis thaliana
AT2G29540 2.0kb upstream 2.0kb upstream 2000 false Chr2: 12640521-12642520 Arabidopsis thaliana
AT2G29540 2.0kb downstream 2.0kb downstream 3424 true Chr2: 12642521-12645944 Arabidopsis thaliana
AT2G29540 2.0kb downstream 2.0kb downstream 2000 false Chr2: 12643945-12645944 Arabidopsis thaliana
AT2G29540 5.0kb upstream 5.0kb upstream 6424 true Chr2: 12637521-12643944 Arabidopsis thaliana
AT2G29540 5.0kb upstream 5.0kb upstream 5000 false Chr2: 12637521-12642520 Arabidopsis thaliana
AT2G29540 5.0kb downstream 5.0kb downstream 6424 true Chr2: 12642521-12648944 Arabidopsis thaliana
AT2G29540 5.0kb downstream 5.0kb downstream 5000 false Chr2: 12643945-12648944 Arabidopsis thaliana
AT2G29540 10.0kb upstream 10.0kb upstream 11424 true Chr2: 12632521-12643944 Arabidopsis thaliana
AT2G29540 10.0kb upstream 10.0kb upstream 10000 false Chr2: 12632521-12642520 Arabidopsis thaliana
AT2G29540 10.0kb downstream 10.0kb downstream 11424 true Chr2: 12642521-12653944 Arabidopsis thaliana
AT2G29540 10.0kb downstream 10.0kb downstream 10000 false Chr2: 12643945-12653944 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122329554 5261 Brassicaceae Singleton cluster - no MSA
123770852 5264 Brassicales-Malvales Singleton cluster - no MSA
124269387 5266 SBM Singleton cluster - no MSA
124125531 5268 Malvidae Singleton cluster - no MSA
124064164 5270 Rosid View MSA
123749269 5271 Pentapetalae View MSA
122790811 5272 Eudicot View MSA
122043921 5273 Angiosperm View MSA
121349469 5274 Embryophyte View MSA
123424853 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.395        
cufflinks 2.582        
cufflinks 1.662        
cufflinks 2.51        
cufflinks 1.415       Low
cufflinks 3.058       High

0 Strain