Gene : EXPA6 A. thaliana TAIR10
Primary Identifier:  ? AT2G28950 Defline:  (1 of 35) PF01357//PF03330 - Pollen allergen (Pollen_allerg_1) // Rare lipoprotein A (RlpA)-like double-psi beta-barrel (DPBB_1)
Genomic Order:  2185 Name:  ? AT2G28950
Secondary Identifier:  ? PAC:19642628
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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G28950 0.5kb upstream 0.5kb upstream 2755 true Chr2: 12431341-12434095 Arabidopsis thaliana
AT2G28950 0.5kb upstream 0.5kb upstream 500 false Chr2: 12433596-12434095 Arabidopsis thaliana
AT2G28950 0.5kb downstream 0.5kb downstream 2755 true Chr2: 12430841-12433595 Arabidopsis thaliana
AT2G28950 0.5kb downstream 0.5kb downstream 500 false Chr2: 12430841-12431340 Arabidopsis thaliana
AT2G28950 1.0kb upstream 1.0kb upstream 3255 true Chr2: 12431341-12434595 Arabidopsis thaliana
AT2G28950 1.0kb upstream 1.0kb upstream 1000 false Chr2: 12433596-12434595 Arabidopsis thaliana
AT2G28950 1.0kb downstream 1.0kb downstream 3255 true Chr2: 12430341-12433595 Arabidopsis thaliana
AT2G28950 1.0kb downstream 1.0kb downstream 1000 false Chr2: 12430341-12431340 Arabidopsis thaliana
AT2G28950 2.0kb upstream 2.0kb upstream 4255 true Chr2: 12431341-12435595 Arabidopsis thaliana
AT2G28950 2.0kb upstream 2.0kb upstream 2000 false Chr2: 12433596-12435595 Arabidopsis thaliana
AT2G28950 2.0kb downstream 2.0kb downstream 4255 true Chr2: 12429341-12433595 Arabidopsis thaliana
AT2G28950 2.0kb downstream 2.0kb downstream 2000 false Chr2: 12429341-12431340 Arabidopsis thaliana
AT2G28950 5.0kb upstream 5.0kb upstream 7255 true Chr2: 12431341-12438595 Arabidopsis thaliana
AT2G28950 5.0kb upstream 5.0kb upstream 5000 false Chr2: 12433596-12438595 Arabidopsis thaliana
AT2G28950 5.0kb downstream 5.0kb downstream 7255 true Chr2: 12426341-12433595 Arabidopsis thaliana
AT2G28950 5.0kb downstream 5.0kb downstream 5000 false Chr2: 12426341-12431340 Arabidopsis thaliana
AT2G28950 10.0kb upstream 10.0kb upstream 12255 true Chr2: 12431341-12443595 Arabidopsis thaliana
AT2G28950 10.0kb upstream 10.0kb upstream 10000 false Chr2: 12433596-12443595 Arabidopsis thaliana
AT2G28950 10.0kb downstream 10.0kb downstream 12255 true Chr2: 12421341-12433595 Arabidopsis thaliana
AT2G28950 10.0kb downstream 10.0kb downstream 10000 false Chr2: 12421341-12431340 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124351028 5266 SBM View MSA
122365953 5261 Brassicaceae View MSA
123839311 5264 Brassicales-Malvales View MSA
124249607 5268 Malvidae View MSA
124071064 5270 Rosid View MSA
123750763 5271 Pentapetalae View MSA
122796391 5272 Eudicot View MSA
122047888 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.303     High  
cufflinks 45.463     High  
cufflinks 23.729        
cufflinks 36.751     High  
cufflinks 16.119       Low
cufflinks 50.909     High  

0 Strain