Gene : AT2G28940 A. thaliana TAIR10
Defline:  (1 of 39) PF00069//PF07714 - Protein kinase domain (Pkinase) // Protein tyrosine kinase (Pkinase_Tyr) Genomic Order:  2184
Name:  ? AT2G28940 Secondary Identifier:  ? PAC:19641320
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G28940 0.5kb upstream 0.5kb upstream 2521 true Chr2: 12426710-12429230 Arabidopsis thaliana
AT2G28940 0.5kb upstream 0.5kb upstream 500 false Chr2: 12428731-12429230 Arabidopsis thaliana
AT2G28940 0.5kb downstream 0.5kb downstream 2521 true Chr2: 12426210-12428730 Arabidopsis thaliana
AT2G28940 0.5kb downstream 0.5kb downstream 500 false Chr2: 12426210-12426709 Arabidopsis thaliana
AT2G28940 1.0kb upstream 1.0kb upstream 3021 true Chr2: 12426710-12429730 Arabidopsis thaliana
AT2G28940 1.0kb upstream 1.0kb upstream 1000 false Chr2: 12428731-12429730 Arabidopsis thaliana
AT2G28940 1.0kb downstream 1.0kb downstream 3021 true Chr2: 12425710-12428730 Arabidopsis thaliana
AT2G28940 1.0kb downstream 1.0kb downstream 1000 false Chr2: 12425710-12426709 Arabidopsis thaliana
AT2G28940 2.0kb upstream 2.0kb upstream 4021 true Chr2: 12426710-12430730 Arabidopsis thaliana
AT2G28940 2.0kb upstream 2.0kb upstream 2000 false Chr2: 12428731-12430730 Arabidopsis thaliana
AT2G28940 2.0kb downstream 2.0kb downstream 4021 true Chr2: 12424710-12428730 Arabidopsis thaliana
AT2G28940 2.0kb downstream 2.0kb downstream 2000 false Chr2: 12424710-12426709 Arabidopsis thaliana
AT2G28940 5.0kb upstream 5.0kb upstream 7021 true Chr2: 12426710-12433730 Arabidopsis thaliana
AT2G28940 5.0kb upstream 5.0kb upstream 5000 false Chr2: 12428731-12433730 Arabidopsis thaliana
AT2G28940 5.0kb downstream 5.0kb downstream 7021 true Chr2: 12421710-12428730 Arabidopsis thaliana
AT2G28940 5.0kb downstream 5.0kb downstream 5000 false Chr2: 12421710-12426709 Arabidopsis thaliana
AT2G28940 10.0kb upstream 10.0kb upstream 12021 true Chr2: 12426710-12438730 Arabidopsis thaliana
AT2G28940 10.0kb upstream 10.0kb upstream 10000 false Chr2: 12428731-12438730 Arabidopsis thaliana
AT2G28940 10.0kb downstream 10.0kb downstream 12021 true Chr2: 12416710-12428730 Arabidopsis thaliana
AT2G28940 10.0kb downstream 10.0kb downstream 10000 false Chr2: 12416710-12426709 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367786 5261 Brassicaceae View MSA
123837201 5264 Brassicales-Malvales View MSA
124344868 5266 SBM View MSA
124239591 5268 Malvidae View MSA
124068019 5270 Rosid View MSA
123738019 5271 Pentapetalae View MSA
122786117 5272 Eudicot View MSA
122042088 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350468 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.364       High
cufflinks 6.113        
cufflinks 4.864       Low
cufflinks 6.67        
cufflinks 6.136        
cufflinks 5.699        

0 Strain