Gene : CYP707A2 A. thaliana TAIR10

Primary Identifier:  ? AT2G29090 Defline:  (1 of 1) PTHR24286:SF86 - ABSCISIC ACID 8'-HYDROXYLASE 2
Genomic Order:  2198 Name:  ? AT2G29090
Secondary Identifier:  ? PAC:19642710

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5271 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G29090 0.5kb upstream 0.5kb upstream 5373 true Chr2: 12494851-12500223 Arabidopsis thaliana
AT2G29090 0.5kb upstream 0.5kb upstream 500 false Chr2: 12499724-12500223 Arabidopsis thaliana
AT2G29090 0.5kb downstream 0.5kb downstream 5373 true Chr2: 12494351-12499723 Arabidopsis thaliana
AT2G29090 0.5kb downstream 0.5kb downstream 500 false Chr2: 12494351-12494850 Arabidopsis thaliana
AT2G29090 1.0kb upstream 1.0kb upstream 5873 true Chr2: 12494851-12500723 Arabidopsis thaliana
AT2G29090 1.0kb upstream 1.0kb upstream 1000 false Chr2: 12499724-12500723 Arabidopsis thaliana
AT2G29090 1.0kb downstream 1.0kb downstream 5873 true Chr2: 12493851-12499723 Arabidopsis thaliana
AT2G29090 1.0kb downstream 1.0kb downstream 1000 false Chr2: 12493851-12494850 Arabidopsis thaliana
AT2G29090 2.0kb upstream 2.0kb upstream 6873 true Chr2: 12494851-12501723 Arabidopsis thaliana
AT2G29090 2.0kb upstream 2.0kb upstream 2000 false Chr2: 12499724-12501723 Arabidopsis thaliana
AT2G29090 2.0kb downstream 2.0kb downstream 6873 true Chr2: 12492851-12499723 Arabidopsis thaliana
AT2G29090 2.0kb downstream 2.0kb downstream 2000 false Chr2: 12492851-12494850 Arabidopsis thaliana
AT2G29090 5.0kb upstream 5.0kb upstream 9873 true Chr2: 12494851-12504723 Arabidopsis thaliana
AT2G29090 5.0kb upstream 5.0kb upstream 5000 false Chr2: 12499724-12504723 Arabidopsis thaliana
AT2G29090 5.0kb downstream 5.0kb downstream 9873 true Chr2: 12489851-12499723 Arabidopsis thaliana
AT2G29090 5.0kb downstream 5.0kb downstream 5000 false Chr2: 12489851-12494850 Arabidopsis thaliana
AT2G29090 10.0kb upstream 10.0kb upstream 14873 true Chr2: 12494851-12509723 Arabidopsis thaliana
AT2G29090 10.0kb upstream 10.0kb upstream 10000 false Chr2: 12499724-12509723 Arabidopsis thaliana
AT2G29090 10.0kb downstream 10.0kb downstream 14873 true Chr2: 12484851-12499723 Arabidopsis thaliana
AT2G29090 10.0kb downstream 10.0kb downstream 10000 false Chr2: 12484851-12494850 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372552 5261 Brassicaceae View MSA
123831515 5264 Brassicales-Malvales View MSA
124341542 5266 SBM View MSA
124242424 5268 Malvidae View MSA
124067645 5270 Rosid View MSA
123747407 5271 Pentapetalae View MSA
122789954 5272 Eudicot View MSA
122044932 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121350004 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.302       High
cufflinks 0.034     Low Low
cufflinks 0.076     Low  
cufflinks 0.089     Low  
cufflinks 0.175     Low  
cufflinks 0.033     Low Low

0 Strain