Gene : LCR5 A. thaliana TAIR10
Primary Identifier:  ? AT2G28355 Defline:  (1 of 42) PF07333 - S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) (SLR1-BP)
Genomic Order:  2121 Name:  ? AT2G28355
Secondary Identifier:  ? PAC:19638250
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G28355 0.5kb upstream 0.5kb upstream 1460 true Chr2: 12118820-12120279 Arabidopsis thaliana
AT2G28355 0.5kb upstream 0.5kb upstream 500 false Chr2: 12118820-12119319 Arabidopsis thaliana
AT2G28355 0.5kb downstream 0.5kb downstream 1460 true Chr2: 12119320-12120779 Arabidopsis thaliana
AT2G28355 0.5kb downstream 0.5kb downstream 500 false Chr2: 12120280-12120779 Arabidopsis thaliana
AT2G28355 1.0kb upstream 1.0kb upstream 1960 true Chr2: 12118320-12120279 Arabidopsis thaliana
AT2G28355 1.0kb upstream 1.0kb upstream 1000 false Chr2: 12118320-12119319 Arabidopsis thaliana
AT2G28355 1.0kb downstream 1.0kb downstream 1960 true Chr2: 12119320-12121279 Arabidopsis thaliana
AT2G28355 1.0kb downstream 1.0kb downstream 1000 false Chr2: 12120280-12121279 Arabidopsis thaliana
AT2G28355 2.0kb upstream 2.0kb upstream 2960 true Chr2: 12117320-12120279 Arabidopsis thaliana
AT2G28355 2.0kb upstream 2.0kb upstream 2000 false Chr2: 12117320-12119319 Arabidopsis thaliana
AT2G28355 2.0kb downstream 2.0kb downstream 2960 true Chr2: 12119320-12122279 Arabidopsis thaliana
AT2G28355 2.0kb downstream 2.0kb downstream 2000 false Chr2: 12120280-12122279 Arabidopsis thaliana
AT2G28355 5.0kb upstream 5.0kb upstream 5960 true Chr2: 12114320-12120279 Arabidopsis thaliana
AT2G28355 5.0kb upstream 5.0kb upstream 5000 false Chr2: 12114320-12119319 Arabidopsis thaliana
AT2G28355 5.0kb downstream 5.0kb downstream 5960 true Chr2: 12119320-12125279 Arabidopsis thaliana
AT2G28355 5.0kb downstream 5.0kb downstream 5000 false Chr2: 12120280-12125279 Arabidopsis thaliana
AT2G28355 10.0kb upstream 10.0kb upstream 10960 true Chr2: 12109320-12120279 Arabidopsis thaliana
AT2G28355 10.0kb upstream 10.0kb upstream 10000 false Chr2: 12109320-12119319 Arabidopsis thaliana
AT2G28355 10.0kb downstream 10.0kb downstream 10960 true Chr2: 12119320-12130279 Arabidopsis thaliana
AT2G28355 10.0kb downstream 10.0kb downstream 10000 false Chr2: 12120280-12130279 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792133 5273 Angiosperm View MSA
122380398 5261 Brassicaceae View MSA
123841300 5264 Brassicales-Malvales View MSA
124322889 5266 SBM View MSA
124251397 5268 Malvidae View MSA
124067401 5270 Rosid View MSA
123743891 5271 Pentapetalae View MSA
122796538 5272 Eudicot View MSA
121063384 5274 Embryophyte View MSA
123103137 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain