Gene : SYD A. thaliana TAIR10
Primary Identifier:  ? AT2G28290 Defline:  (1 of 2) PTHR10799//PTHR10799:SF783 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // SUBFAMILY NOT NAMED
Genomic Order:  2113 Name:  ? AT2G28290
Secondary Identifier:  ? PAC:19641296
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G28290 0.5kb upstream 0.5kb upstream 17371 true Chr2: 12055713-12073083 Arabidopsis thaliana
AT2G28290 0.5kb upstream 0.5kb upstream 500 false Chr2: 12055713-12056212 Arabidopsis thaliana
AT2G28290 0.5kb downstream 0.5kb downstream 17371 true Chr2: 12056213-12073583 Arabidopsis thaliana
AT2G28290 0.5kb downstream 0.5kb downstream 500 false Chr2: 12073084-12073583 Arabidopsis thaliana
AT2G28290 1.0kb upstream 1.0kb upstream 17871 true Chr2: 12055213-12073083 Arabidopsis thaliana
AT2G28290 1.0kb upstream 1.0kb upstream 1000 false Chr2: 12055213-12056212 Arabidopsis thaliana
AT2G28290 1.0kb downstream 1.0kb downstream 17871 true Chr2: 12056213-12074083 Arabidopsis thaliana
AT2G28290 1.0kb downstream 1.0kb downstream 1000 false Chr2: 12073084-12074083 Arabidopsis thaliana
AT2G28290 2.0kb upstream 2.0kb upstream 18871 true Chr2: 12054213-12073083 Arabidopsis thaliana
AT2G28290 2.0kb upstream 2.0kb upstream 2000 false Chr2: 12054213-12056212 Arabidopsis thaliana
AT2G28290 2.0kb downstream 2.0kb downstream 18871 true Chr2: 12056213-12075083 Arabidopsis thaliana
AT2G28290 2.0kb downstream 2.0kb downstream 2000 false Chr2: 12073084-12075083 Arabidopsis thaliana
AT2G28290 5.0kb upstream 5.0kb upstream 21871 true Chr2: 12051213-12073083 Arabidopsis thaliana
AT2G28290 5.0kb upstream 5.0kb upstream 5000 false Chr2: 12051213-12056212 Arabidopsis thaliana
AT2G28290 5.0kb downstream 5.0kb downstream 21871 true Chr2: 12056213-12078083 Arabidopsis thaliana
AT2G28290 5.0kb downstream 5.0kb downstream 5000 false Chr2: 12073084-12078083 Arabidopsis thaliana
AT2G28290 10.0kb upstream 10.0kb upstream 26871 true Chr2: 12046213-12073083 Arabidopsis thaliana
AT2G28290 10.0kb upstream 10.0kb upstream 10000 false Chr2: 12046213-12056212 Arabidopsis thaliana
AT2G28290 10.0kb downstream 10.0kb downstream 26871 true Chr2: 12056213-12083083 Arabidopsis thaliana
AT2G28290 10.0kb downstream 10.0kb downstream 10000 false Chr2: 12073084-12083083 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374329 5261 Brassicaceae View MSA
123841275 5264 Brassicales-Malvales View MSA
124338037 5266 SBM View MSA
124252132 5268 Malvidae View MSA
124062912 5270 Rosid View MSA
123737195 5271 Pentapetalae View MSA
122791626 5272 Eudicot View MSA
122049865 5273 Angiosperm View MSA
121348487 5274 Embryophyte View MSA
123427983 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.24        
cufflinks 5.364        
cufflinks 3.325       Low
cufflinks 5.716        
cufflinks 3.71        
cufflinks 5.611        

0 Strain